# # flybase-ng server installation notes # alpha 2 release; may03, d.gilbert # This flybase-ng system is designed for automatic installation and updates of flybase and other genome information servers. Server packages are (mostly) at rsync://flybase.net/biodb Web notes are at http://flybase.net/ng/ Installation of a full FlyBase or other server will require several gigabytes of disk space. Some of these hosts have this server running http://cricket.bio.indiana.edu:8081/ -- solaris http://flybase.bio.indiana.edu:8081/ -- solaris http://chervil.bio.indiana.edu:8081/ -- linux http://marmot.bio.indiana.edu:8081/ -- macosx INSTALL STEPS (old, by-hand): 1. To install, see install/rsync.run document (still rough), basically this, rsync -n -avuz rsync://flybase.net/biodb /bio/biodb but need to set system-local and other parts by-hand 2. The default /bio/biodb root path is easiest to use for now. Otherwise, see install/changeroot script. 3. Run install/webstart to start web server 1b. FlyBase packages are split in separately located parts (most are Gigabyte sized): package: flybase-main description: flybase-ng main server packages url: rsync://flybase.net/biodb/flybase/ localpath: /bio/biodb/flybase/ package: flybase-data description: flybase public data files url: rsync://flybase.net/fbdata1/ localpath: /bio/biodb/flybase/data/ package: flybase-etc description: flybase miscellany data, configs, etc. url: rsync://flybase.net/fbserver/server/.etc/ localpath: /bio/biodb/flybase/etc/ note: updates to flybase-ng in progress for this section; source out-of-date package: flybase-indices description: flybase data indices, database files url: rsync://flybase.net/fbserver/indices/ localpath: /bio/biodb/flybase/indices/ package: bionet-drosophila description: bionet drosophila news archive url: rsync://flybase.net/fbserver/usenet/