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what is the strongest protein-protein interaction?

Aawara Chowdhury via methods%40net.bio.net (by aawara from pontiff-playground.org)
Sun Dec 28 17:23:40 EST 2008


In <3kIUk.8581$ev2.3155 from newsfe12.iad>,
 DK <dk from no.email.thankstospam.net> wrote:

> To the OP, I would suggest artificial coiled coils. Basically, a pair of 
> 21 aa peptides used as interacting tags. One is very, very basic,
> another is very, very acidic -  both conforming to the canonical coiled 
> coil heptade repeat, so the only coiled coil formed is a heterodimer. 
> I don't have a ref. but have a xerox somewhere at work. The affinity 
> of such pair is subnanomolar. 

I've used a modified version of the GCN4 leucine zipper for this purpose.
Sadly, I don't have the reference handy - I am at home, but this worked
very well to induce dimerization.  If it helps any, the paper that I got
the sequence from was from Peter Kim's lab, and published in Biochemistry.

AC
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