; TeX output 1993.01.20:1045 /B3nOUcfmBK`y G
cmr10BDoubleKDigesterManOual 4K`y ff
cmr10Version1.1Beta ߊ kManualbyJohnReinitz,Ju eProgrambyLawrenceWrightVk W+XQ cmr12CenrterforMedicalInformaticsUMDYValeMedicalScrhoSol,333CedarSt.,NewHaven,CT06510USA */B3nH"V G
cmbx10HCon4tentsBE0N cmbx121Getting Started_ߍ4UM1.1,JASimpleExampletԍ,g cmmi12: C:::::::::::::::::::::::::::::::{4,J1.1.1R?TheMainDDWindorw: C:::::::::::::::::::::::::{4,J1.1.2R?LoadingaFile ҷ: C::::::::::::::::::::::::::::::{5,J1.1.3R?MakingaRestrictionMapič: C:::::::::::::::::::::::{5,J1.1.4R?TheImpSortanceofConstrainrtsxP: C::::::::::::::::::::{5,J1.1.5R?ExpSerimenrtalError鍑: C:::::::::::::::::::::::::::{6,J1.1.6R?AssertingConstrainrts؍: C::::::::::::::::::::::::::{6,J1.1.7R?SarvingtoaFileH: C:::::::::::::::::::::::::::::{61.2,JDataEnrtry6: C:::::::::::::::::::::::::::::::::::{7,J1.2.1R?GraphicalDataEnrtryA: C:::::::::::::::::::::::::{7,J1.2.2R?TrypinginVValues:ލ: C::::::::::::::::::::::::::::{71.3,JDoingMoreWithDD ): C:::::::::::::::::::::::::::::{8E2Referencep92.1,JSixMainWindorws@6: C:::::::::::::::::::::::::::::::{9,J2.1.1R?ButtonskB: C:::::::::::::::::::::::::::::::::{9R?2.1.1.1 lxPropupMenus.: C::::::::::::::::::::::::102.2,JTheTVopWindorw: C::::::::::::::::::::::::::::::::10,J2.2.1R?Help: C:::::::::::::::::::::::::::::::::::10,J2.2.2R?CongureÍ: C::::::::::::::::::::::::::::::::11R?2.2.2.1 lxDisplaryinMonoSchrome/Color.: C:::::::::::::::11R?2.2.2.2 lxSetDefaultDataDirectoryV.ZÍ: C:::::::::::::::::11R?2.2.2.3 lxShorwDetailsofMapBuilding.;: C:::::::::::::::12,J2.2.3R?Exit: C:::::::::::::::::::::::::::::::::::122.3,JTheDigestDataWindorwa: C:::::::::::::::::::::::::::12,J2.3.1R?Digests: C::::::::::::::::::::::::::::::::::12R?2.3.1.1 lxMethoSd1:8GraphicalInrterface.p: C:::::::::::::::13R?2.3.1.2 lxMethoSd2:8TrypeinVValues.ꍑ: C:::::::::::::::::13R?2.3.1.3 lxLoadedFilesandDoubleDigests.o^: C::::::::::::::14R?2.3.1.4 lxOtherFilesinDataDirectoryV.+Ս: C::::::::::::::::14R?2.3.1.5 lxSubSdirectoriesofDataDirectoryV.,*: C::::::::::::::142 1 ՠ/B3 d/}h! cmsl12CONTENTSdd[cDDmanrualr rGnR?2.3.1.6 lxMorveUpDirectoryTVree.6: C:::::::::::::::::::15UM,J2.3.2R?Sarve: C:::::::::::::::::::::::::::::::::::15R?2.3.2.1 lxSarveDatainaNewFile.7: C:::::::::::::::::::15R?2.3.2.2 lxAppSendDatatoanExistingFile.: C::::::::::::::15R?2.3.2.3 lxReplaceDatainanExistingFile.7捑: C::::::::::::::16,J2.3.3R?ErrorV: C:::::::::::::::::::::::::::::::::::16R?2.3.3.1 lxChangeSize-EstimateErrorRanges.M: C::::::::::::16R?2.3.3.2 lxChangeBasisofSizeComparisons.): C:::::::::::::16R?2.3.3.3 lxUnseenFVragmenrts:8SizeCeiling. 0l: C::::::::::::::17R?2.3.3.4 lxUnseenFVragmenrts:8NumbSerAllowedPerMatch.: C:::::17,J2.3.4R?Other&: C::::::::::::::::::::::::::::::::::17R?2.3.4.1 lxChoSoseLaneStandard.: C:::::::::::::::::::17R?2.3.4.2 lxDropLaneStandard.l: C:::::::::::::::::::::18R?2.3.4.3 lxHide/ShorwLaneStandard.: C:::::::::::::::::18R?2.3.4.4 lxCritiqueCurrenrtData.: C::::::::::::::::::::18R?2.3.4.5 lxHide/ShorwSettings.F㍑: C:::::::::::::::::::::18R?2.3.4.6 lxRenameDigest.\: C::::::::::::::::::::::::18R?2.3.4.7 lxSetDNATrypSe.3: C::::::::::::::::::::::::19,J2.3.5R?Digest:8
d": C:::::::::::::::::::::::::::::19,J2.3.6R?GelLaneTitle 02: C:::::::::::::::::::::::::::::19R?2.3.6.1 lxAddNewFVragmenrtsviaMouse. 鲍: C:::::::::::::::19R?2.3.6.2 lxAddNewFVragmenrtsviaKeybSoard.5: C:::::::::::::19R?2.3.6.3 lxChangeSize-EstimateErrorRanges.M: C::::::::::::20R?2.3.6.4 lxChangeEnzyme(orLaneStandard).: C::::::::::::20,J2.3.7R?BandonGel X: C:::::::::::::::::::::::::::::::20R?2.3.7.1 lxAbSoutFVragmenrt. Ķ: C::::::::::::::20R?2.3.7.2 lxAssertConstrainrt.͍: C::::::::::::::::::::::20R?2.3.7.3 lxIdenrtical.4: C:::::::::::::::::::::::::::20R?2.3.7.4 lxNotIdenrtical.Ѝ: C:::::::::::::::::::::::::20R?2.3.7.5 lxBiggerThan.: C:::::::::::::::::::::::::21R?2.3.7.6 lxSmallerThan.D̍: C:::::::::::::::::::::::::21R?2.3.7.7 lxConrtains(PartOf 8).: C:::::::::::::::::::::21R?2.3.7.8 lxNotConrtains(NotPartof 8).: C:::::::::::::::::21R?2.3.7.9 lxChangeSize-EstimateErrorRanges.M: C::::::::::::21R?2.3.7.10 lxChangeSizeData.: C::::::::::::::::::::::21R?2.3.7.11 lxRemorveFVragment.: C::::::::::::::::::::::212.4,JTheConstrainrtsWindow: C::::::::::::::::::::::::::::22,J2.4.1R?ConstrainrtsǍ: C:::::::::::::::::::::::::::::::22R?2.4.1.1 lxDrop.W: C:::::::::::::::::::::::::::::22R?2.4.1.2 lxNegate(Un-Negate).: C:::::::::::::::::::::22,J2.4.2R?Add
h: C:::::::::::::::::::::::::::::::::::22R?2.4.2.1 lxIdenrtical.4: C:::::::::::::::::::::::::::222d 2 !H/B3 dCONTENTSdd[cDDmanrualr rGnR?2.4.2.2 lxNotIdenrtical.Ѝ: C:::::::::::::::::::::::::22UMR?2.4.2.3 lxBiggerThan.: C:::::::::::::::::::::::::23R?2.4.2.4 lxSmallerThan.D̍: C:::::::::::::::::::::::::23R?2.4.2.5 lxConrtains(PartOf 8).: C:::::::::::::::::::::23R?2.4.2.6 lxNotConrtains(NotPartof 8).: C:::::::::::::::::23,J2.4.3R?Dropp: C:::::::::::::::::::::::::::::::::::23,J2.4.4R?Negate: C::::::::::::::::::::::::::::::::::232.5,JMaps: C:::::::::::::::::::::::::::::::::::::::23,J2.5.1R?MakreMaps: C:::::::::::::::::::::::::::::::24R?2.5.1.1 lxNOTE,WARNINGorERRrORconcerningyourdata.: C::24R?2.5.1.2 lxWARNING:ThisloSokslikreahardproblem.z: C::::::::24,J2.5.2R?CongureÍ: C::::::::::::::::::::::::::::::::24R?2.5.2.1 lxChangeMapDisplaryFVormat.F#: C::::::::::::::::24R?2.5.2.2 lxChangeMapFileOutputStryle.: C:::::::::::::::25R?2.5.2.3 lxAncrhoraDoubleDigestFVragmentinLeft/12-O'CloSckPosition.vd25,J2.5.3R?Sarve: C:::::::::::::::::::::::::::::::::::25R?2.5.3.1 lxChangeMapFileOutputStryle.: C:::::::::::::::25R?2.5.3.2 lxSarveAllMapstoFile.: C::::::::::::::::::::25R?2.5.3.3 lxSarveCurrentMaptoFile.䍑: C::::::::::::::::::262.6,JMatcrhDetailsm
: C::::::::::::::::::::::::::::::::::26E3Installation andIn ternals ?273.1,JMacinrtoshP: C::::::::::::::::::::::::::::::::::::27,J3.1.1R?Installation|: C:::::::::::::::::::::::::::::::27,J3.1.2R?TVroubleshoSoting: C:::::::::::::::::::::::::::::283.2,JUnixandX11: C::::::::::::::::::::::::::::::::::28,J3.2.1R?Installation|: C:::::::::::::::::::::::::::::::28,J3.2.2R?TVroubleshoSoting: C:::::::::::::::::::::::::::::293.3,JAllVVersionsލ: C:::::::::::::::::::::::::::::::::::29,J3.3.1R?ErrorRecorvery#: C:::::::::::::::::::::::::::::29,J3.3.2R?MemoryManagemenrt: C::::::::::::::::::::::::::29,J3.3.3R?SarvingLargeMapFiles ȍ: C::::::::::::::::::::::::303.4,JFVurtherInformationandSuggestions : C:::::::::::::::::::::302d 3 IӠ/B3nHChapter 12 Getting Started8k͍Double Digester(DD)isaprogramdesignedtohelpyroumakerestrictionmapsfromgelUMdata.\YVou|givreitfragmentsizesfromtwodierentsinglerestrictiondigeststogetherwiththeq