Gene name Accession Number HGNC ID Sample name ID_sample ID_tumour Primary site Site subtype Primary histology Histology subtype Genome-wide screen Mutation ID Mutation CDS Mutation AA Mutation Description Mutation zygosity Mutation NCBI36 genome position Mutation NCBI36 strand Mutation GRCh37 genome position Mutation GRCh37 strand Mutation somatic status Pubmed_PMID Sample source Tumour origin Comments A2M ENST00000404455 7 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180293 c.430G>T p.V144L Substitution - Missense unk 12:9264973-9264973 - Confirmed somatic variant NS NS Stage:I AARS ENST00000261772 20 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194801 c.908G>A p.R303Q Substitution - Missense unk 16:70303575-70303575 - Confirmed somatic variant NS NS Stage:I ABCA8 ENST00000269080 38 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194086 c.3986C>T p.A1329V Substitution - Missense unk 17:66873753-66873753 - Confirmed somatic variant NS NS Stage:I ABCB11 ENST00000263817 42 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207909 c.1374A>G p.G458G Substitution - coding silent unk 2:169830285-169830285 - Confirmed somatic variant NS NS Stage:I ABCB11 ENST00000263817 42 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207911 c.403G>A p.E135K Substitution - Missense unk 2:169853219-169853219 - Confirmed somatic variant NS NS Stage:I ABCC1 NM_004996.2 51 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181757 c.3848C>T p.P1283L Substitution - Missense unk 16:16225674-16225674 + Confirmed somatic variant NS NS Stage:I ABCC11 ENST00000356608 14639 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189702 c.3682C>A p.L1228I Substitution - Missense unk 16:48209185-48209185 - Confirmed somatic variant NS NS Stage:I ABCC5 NM_005688.1 56 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209000 c.2896A>G p.T966A Substitution - Missense unk 3:183669277-183669277 - Confirmed somatic variant NS NS Stage:I ABCC8 NM_000352.2 59 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181983 c.4612C>T p.R1538* Substitution - Nonsense unk 11:17414672-17414672 - Confirmed somatic variant NS NS Stage:I ABCD1 NM_000033.2 61 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206536 c.1534G>A p.G512S Substitution - Missense unk 23:153005591-153005591 + Confirmed somatic variant NS NS Stage:I ABCG4 ENST00000307417 13884 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202236 c.79G>A p.G27R Substitution - Missense unk 11:119020754-119020754 + Confirmed somatic variant NS NS Stage:I ABHD11 ENST00000222800 16407 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195754 c.870G>A p.T290T Substitution - coding silent unk 7:73150967-73150967 - Confirmed somatic variant NS NS Stage:I ACBD3 ENST00000366812 15453 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210171 c.332A>G p.K111R Substitution - Missense unk 1:226353656-226353656 - Confirmed somatic variant NS NS Stage:I ACCS ENST00000263776 23989 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188892 c.1273T>G p.F425V Substitution - Missense unk 11:44104992-44104992 + Confirmed somatic variant NS NS Stage:I ACE ENST00000290866 2707 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192944 c.3684G>A p.P1228P Substitution - coding silent unk 17:61574339-61574339 + Confirmed somatic variant NS NS Stage:I ACOT7 ENST00000361521 24157 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179427 c.946G>A p.A316T Substitution - Missense unk 1:6341230-6341230 - Confirmed somatic variant NS NS Stage:I ACTBL2 ENST00000306758 17780 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192529 c.393A>G p.P131P Substitution - coding silent unk 5:56778142-56778142 - Confirmed somatic variant NS NS Stage:I ACTL6B ENST00000160382 160 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199514 c.369G>A p.P123P Substitution - coding silent unk 7:100252642-100252642 - Confirmed somatic variant NS NS Stage:I ACTL9 ENST00000324436 28494 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180106 c.1199G>A p.R400Q Substitution - Missense unk 19:8807853-8807853 - Confirmed somatic variant NS NS Stage:I ACVR1B NM_020328 172 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190899 c.998A>G p.H333R Substitution - Missense unk 12:52378994-52378994 + Confirmed somatic variant NS NS Stage:I ACVR1B_ENST00000541224 ENST00000541224 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190900 c.1121A>G p.H374R Substitution - Missense unk 12:52378994-52378994 + Confirmed somatic variant NS NS Stage:I ADAM28 NM_014265.2 206 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183661 c.1710G>A p.S570S Substitution - coding silent unk 8:24199150-24199150 + Confirmed somatic variant NS NS Stage:I ADAM29 NM_014269.2 207 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208239 c.1198T>A p.C400S Substitution - Missense unk 4:175897874-175897874 + Confirmed somatic variant NS NS Stage:I ADAM30 NM_021794.2 208 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202446 c.2339C>T p.P780L Substitution - Missense unk 1:120436621-120436621 - Confirmed somatic variant NS NS Stage:I ADAMTS12 NM_030955.2 14605 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185970 c.3688G>A p.E1230K Substitution - Missense unk 5:33576443-33576443 - Confirmed somatic variant NS NS Stage:I ADAMTS12 NM_030955.2 14605 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186041 c.412C>A p.L138I Substitution - Missense unk 5:33881301-33881301 - Confirmed somatic variant NS NS Stage:I ADAMTS12_ENST00000515401 ENST00000515401 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186042 c.412C>A p.L138I Substitution - Missense unk 5:33881301-33881301 - Confirmed somatic variant NS NS Stage:I ADAMTS17 NM_139057.1 17109 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199130 c.3017G>A p.R1006H Substitution - Missense unk 15:100516360-100516360 - Confirmed somatic variant NS NS Stage:I ADAMTS3 NM_014243.1 219 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195866 c.739C>T p.R247C Substitution - Missense unk 4:73205333-73205333 - Confirmed somatic variant NS NS Stage:I ADAMTSL1 NM_139238.1 14632 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182250 c.214C>T p.R72* Substitution - Nonsense unk 9:18533267-18533267 + Confirmed somatic variant NS NS Stage:I ADAMTSL1_ENST00000380548 ENST00000380548 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182251 c.214C>T p.R72* Substitution - Nonsense unk 9:18533267-18533267 + Confirmed somatic variant NS NS Stage:I ADAMTSL3 NM_207517.1 14633 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197165 c.1495C>T p.R499W Substitution - Missense unk 15:84566637-84566637 + Confirmed somatic variant NS NS Stage:I ADAMTSL5 ENST00000330475 27912 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178181 c.822C>T p.A274A Substitution - coding silent unk 19:1507271-1507271 - Confirmed somatic variant NS NS Stage:I ADAR ENST00000368474 225 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206607 c.675G>A p.P225P Substitution - coding silent unk 1:154574443-154574443 - Confirmed somatic variant NS NS Stage:I ADARB1 ENST00000360697 226 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189279 c.318G>A p.A106A Substitution - coding silent unk 21:46595934-46595934 + Confirmed somatic variant NS NS Stage:I ADARB1_ENST00000389863 ENST00000389863 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189280 c.318G>A p.A106A Substitution - coding silent unk 21:46595934-46595934 + Confirmed somatic variant NS NS Stage:I ADCK4 NM_024876 19041 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189434 c.1507C>T p.R503* Substitution - Nonsense unk 19:41198068-41198068 - Confirmed somatic variant NS NS Stage:I ADCK4_ENST00000324464 ENST00000324464 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189435 c.1507C>T p.R503* Substitution - Nonsense unk 19:41198068-41198068 - Confirmed somatic variant NS NS Stage:I ADCY5 ENST00000309879 236 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203107 c.1982G>A p.R661H Substitution - Missense unk 3:123044275-123044275 - Confirmed somatic variant NS NS Stage:I ADCY6 ENST00000307885 237 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189954 c.395G>A p.R132H Substitution - Missense unk 12:49176823-49176823 - Confirmed somatic variant NS NS Stage:I ADCY9 ENST00000294016 240 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178840 c.3828C>T p.D1276D Substitution - coding silent unk 16:4016010-4016010 - Confirmed somatic variant NS NS Stage:I ADCY9 ENST00000294016 240 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178843 c.2787C>T p.A929A Substitution - coding silent unk 16:4027524-4027524 - Confirmed somatic variant NS NS Stage:I ADD2_ENST00000264436 ENST00000264436 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195312 c.1932G>A p.P644P Substitution - coding silent unk 2:70890806-70890806 - Confirmed somatic variant NS NS Stage:I AGPAT3 ENST00000398058 326 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188942 c.533C>T p.T178M Substitution - Missense unk 21:45390556-45390556 + Confirmed somatic variant NS NS Stage:I AGPHD1 ENST00000388988 34403 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196478 c.674G>A p.G225E Substitution - Missense unk 15:78825564-78825564 + Confirmed somatic variant NS NS Stage:I AGT NM_000029.1 333 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210306 c.307G>A p.A103T Substitution - Missense unk 1:230846290-230846290 - Confirmed somatic variant NS NS Stage:I AIFM2 ENST00000307864 21411 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195530 c.844G>A p.A282T Substitution - Missense unk 10:71874802-71874802 - Confirmed somatic variant NS NS Stage:I AKAP9 NM_147171.1 379 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198315 c.7042A>G p.S2348G Substitution - Missense unk 7:91708453-91708453 + Confirmed somatic variant NS NS Stage:I AKAP9_ENST00000356239 ENST00000356239 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198316 c.7006A>G p.S2336G Substitution - Missense unk 7:91708453-91708453 + Confirmed somatic variant NS NS Stage:I ALDH7A1 NM_001182.2 877 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203267 c.831C>A p.A277A Substitution - coding silent unk 5:125895025-125895025 - Confirmed somatic variant NS NS Stage:I ALMS1 ENST00000264448 428 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195913 c.7779T>C p.H2593H Substitution - coding silent unk 2:73716868-73716868 + Confirmed somatic variant NS NS Stage:I ALMS1 ENST00000264448 428 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195931 c.11925C>T p.N3975N Substitution - coding silent unk 2:73828377-73828377 + Confirmed somatic variant NS NS Stage:I ALOX12 NM_000697.1 429 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179598 c.8G>T p.R3L Substitution - Missense unk 17:6899444-6899444 + Confirmed somatic variant NS NS Stage:I ALPP ENST00000392027 439 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210384 c.629C>T p.T210M Substitution - Missense unk 2:233244618-233244618 + Confirmed somatic variant NS NS Stage:I ANAPC1 NM_022662.2 19988 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201322 c.4799G>A p.R1600Q Substitution - Missense unk 2:112545811-112545811 - Confirmed somatic variant NS NS Stage:I ANK2 ENST00000357077 493 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201687 c.8529C>A p.S2843R Substitution - Missense unk 4:114278303-114278303 + Confirmed somatic variant NS NS Stage:I ANKFY1 ENST00000341657 20763 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178863 c.2336C>T p.A779V Substitution - Missense unk 17:4083080-4083080 - Confirmed somatic variant NS NS Stage:I ANKMY1 ENST00000391987 20987 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210605 c.559C>T p.R187C Substitution - Missense unk 2:241468581-241468581 - Confirmed somatic variant NS NS Stage:I ANKRD17 NM_032217.3 23575 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196010 c.5460A>C p.S1820S Substitution - coding silent unk 4:73957885-73957885 - Confirmed somatic variant NS NS Stage:I ANKRD27 ENST00000306065 25310 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187037 c.968C>T p.T323M Substitution - Missense unk 19:33131228-33131228 - Confirmed somatic variant NS NS Stage:I ANKRD32 ENST00000255667 25408 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198568 c.19C>T p.R7* Substitution - Nonsense unk 5:94014612-94014612 + Confirmed somatic variant NS NS Stage:I ANKRD32_ENST00000265140 ENST00000265140 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198569 c.1927C>T p.R643* Substitution - Nonsense unk 5:94014612-94014612 + Confirmed somatic variant NS NS Stage:I ANKS1B ENST00000547776 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199199 c.394C>A p.L132I Substitution - Missense unk 12:100200457-100200457 - Confirmed somatic variant NS NS Stage:I ANXA7 ENST00000372919 545 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196168 c.1075A>T p.T359S Substitution - Missense unk 10:75139869-75139869 - Confirmed somatic variant NS NS Stage:I AOX1 ENST00000374700 553 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209505 c.1806C>T p.D602D Substitution - coding silent unk 2:201485474-201485474 + Confirmed somatic variant NS NS Stage:I AOX1 ENST00000374700 553 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209507 c.2655C>T p.F885F Substitution - coding silent unk 2:201505907-201505907 + Confirmed somatic variant NS NS Stage:I AP2M1 ENST00000292807 564 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209020 c.550C>T p.L184F Substitution - Missense unk 3:183898757-183898757 + Confirmed somatic variant NS NS Stage:I APBB1IP NM_019043.3 17379 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184211 c.625G>A p.E209K Substitution - Missense unk 10:26800769-26800769 + Confirmed somatic variant NS NS Stage:I APLP1 ENST00000221891 597 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188024 c.1222C>T p.R408C Substitution - Missense unk 19:36365649-36365649 + Confirmed somatic variant NS NS Stage:I ARHGAP18 NM_033515.2 21035 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203818 c.1202G>A p.S401N Substitution - Missense unk 6:129929118-129929118 - Confirmed somatic variant NS NS Stage:I ARHGAP27 ENST00000330929 31813 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187958 c.1595A>C p.Q532P Substitution - Missense unk 17:43472874-43472874 - Confirmed somatic variant NS NS Stage:I ARHGEF2 NM_004723.2 682 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206811 c.2638C>T p.R880C Substitution - Missense unk 1:155920255-155920255 - Confirmed somatic variant NS NS Stage:I ARHGEF40 NM_018071.3 25516 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182766 c.1665G>A p.P555P Substitution - coding silent unk 14:21543850-21543850 + Confirmed somatic variant NS NS Stage:I ARL3 NM_004311.2 694 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200282 c.312T>A p.G104G Substitution - coding silent unk 10:104449653-104449653 - Confirmed somatic variant NS NS Stage:I ARL8A NM_138795.2 25192 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209493 c.172C>T p.R58C Substitution - Missense unk 1:202107528-202107528 - Confirmed somatic variant NS NS Stage:I ASAP2 ENST00000281419 2721 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180346 c.1653C>T p.C551C Substitution - coding silent unk 2:9514980-9514980 + Confirmed somatic variant NS NS Stage:I ASB17 NM_080868.1 19769 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196417 c.390A>G p.A130A Substitution - coding silent unk 1:76397587-76397587 - Confirmed somatic variant NS NS Stage:I ASB2 NM_016150.3 16012 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198493 c.1361G>A p.G454D Substitution - Missense unk 14:94405566-94405566 - Confirmed somatic variant NS NS Stage:I ASB2 NM_016150.3 16012 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198494 c.1129T>C p.Y377H Substitution - Missense unk 14:94405798-94405798 - Confirmed somatic variant NS NS Stage:I ASCC2 ENST00000397771 24103 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184643 c.386G>A p.R129H Substitution - Missense unk 22:30221101-30221101 - Confirmed somatic variant NS NS Stage:I ASGR1 ENST00000269299 742 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179666 c.532G>A p.A178T Substitution - Missense unk 17:7077519-7077519 - Confirmed somatic variant NS NS Stage:I ASTN2 ENST00000361209 17021 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202276 c.1203C>T p.G401G Substitution - coding silent unk 9:119802165-119802165 - Confirmed somatic variant NS NS Stage:I ATF7IP NM_018179.3 20092 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181412 c.1377A>G p.P459P Substitution - coding silent unk 12:14578226-14578226 + Confirmed somatic variant NS NS Stage:I ATG2A ENST00000377264 29028 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194102 c.3527T>A p.L1176Q Substitution - Missense unk 11:64671070-64671070 - Confirmed somatic variant NS NS Stage:I ATHL1 ENST00000312105 26210 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 177943 c.564C>T p.V188V Substitution - coding silent unk 11:292614-292614 + Confirmed somatic variant NS NS Stage:I ATP2B3 NM_021949.1 816 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206457 c.3042C>T p.F1014F Substitution - coding silent unk 23:152826336-152826336 + Confirmed somatic variant NS NS Stage:I ATP2B3 NM_021949.1 816 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206460 c.3258C>T p.G1086G Substitution - coding silent unk 23:152830477-152830477 + Confirmed somatic variant NS NS Stage:I ATP2B3_ENST00000263519 ENST00000263519 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206459 c.3042C>T p.F1014F Substitution - coding silent unk 23:152826336-152826336 + Confirmed somatic variant NS NS Stage:I ATP2B3_ENST00000263519 ENST00000263519 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206462 c.3258C>T p.G1086G Substitution - coding silent unk 23:152830477-152830477 + Confirmed somatic variant NS NS Stage:I ATP2B3_ENST00000370186 ENST00000370186 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206458 c.3000C>T p.F1000F Substitution - coding silent unk 23:152826336-152826336 + Confirmed somatic variant NS NS Stage:I ATP2B3_ENST00000370186 ENST00000370186 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206461 c.3216C>T p.G1072G Substitution - coding silent unk 23:152830477-152830477 + Confirmed somatic variant NS NS Stage:I ATP6V0D1 ENST00000290949 13724 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194403 c.1009G>A p.A337T Substitution - Missense unk 16:67472478-67472478 - Confirmed somatic variant NS NS Stage:I ATP6V0D1 ENST00000290949 13724 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194404 c.829C>T p.L277F Substitution - Missense unk 16:67472761-67472761 - Confirmed somatic variant NS NS Stage:I ATP6V1B1 ENST00000234396 853 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195373 c.113G>A p.R38H Substitution - Missense unk 2:71163197-71163197 + Confirmed somatic variant NS NS Stage:I ATRN ENST00000262919 885 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178724 c.3344C>T p.A1115V Substitution - Missense unk 20:3575147-3575147 + Confirmed somatic variant NS NS Stage:I ATXN1 ENST00000244769 10548 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181816 c.550A>G p.M184V Substitution - Missense unk 6:16327992-16327992 - Confirmed somatic variant NS NS Stage:I AUTS2 ENST00000342771 14262 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194768 c.206G>A p.R69Q Substitution - Missense unk 7:69064845-69064845 + Confirmed somatic variant NS NS Stage:I AUTS2 ENST00000342771 14262 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195042 c.2892G>A p.P964P Substitution - coding silent unk 7:70255094-70255094 + Confirmed somatic variant NS NS Stage:I B4GALT3 ENST00000367998 926 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207326 c.635G>A p.R212Q Substitution - Missense unk 1:161143694-161143694 - Confirmed somatic variant NS NS Stage:I BATF2 ENST00000301887 25163 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194124 c.701G>A p.R234H Substitution - Missense unk 11:64756725-64756725 - Confirmed somatic variant NS NS Stage:I BCAP31 NM_005745.6 16695 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206515 c.372G>A p.S124S Substitution - coding silent unk 23:152969519-152969519 - Confirmed somatic variant NS NS Stage:I BCL2L15 ENST00000369580 33624 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201634 c.58A>G p.M20V Substitution - Missense unk 1:114429940-114429940 - Confirmed somatic variant NS NS Stage:I BCL7A NM_020993.2 1004 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202562 c.454C>T p.Q152* Substitution - Nonsense unk 12:122492725-122492725 + Confirmed somatic variant NS NS Stage:I BCL7C NM_004765.2 1006 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185151 c.454A>G p.I152V Substitution - Missense unk 16:30900255-30900255 - Confirmed somatic variant NS NS Stage:I BEGAIN ENST00000355173 24163 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199512 c.1223G>A p.R408Q Substitution - Missense unk 14:101004865-101004865 - Confirmed somatic variant NS NS Stage:I BEND2 NM_153346.2 28509 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182169 c.1121C>T p.S374L Substitution - Missense unk 23:18213475-18213475 - Confirmed somatic variant NS NS Stage:I BEST2 ENST00000042931 17107 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181086 c.1081C>A p.Q361K Substitution - Missense unk 19:12867087-12867087 + Confirmed somatic variant NS NS Stage:I BPHL ENST00000380375 1094 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178583 c.486C>T p.I162I Substitution - coding silent unk 6:3137600-3137600 + Confirmed somatic variant NS NS Stage:I BRAF NM_004333 1097 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 476 c.1799T>A p.V600E Substitution - Missense unk 7:140099605-140099605 - 7:140453136-140453136 - Confirmed somatic variant NS NS Stage:I BZRAP1 NM_004758.1 16831 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191553 c.4534G>A p.G1512R Substitution - Missense unk 17:56386099-56386099 - Confirmed somatic variant NS NS Stage:I BZRAP1_ENST00000355701 ENST00000355701 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191554 c.4534G>A p.G1512R Substitution - Missense unk 17:56386099-56386099 - Confirmed somatic variant NS NS Stage:I C10orf12 ENST00000286067 23420 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199203 c.1742G>A p.R581H Substitution - Missense unk 10:98742889-98742889 + Confirmed somatic variant NS NS Stage:I C11orf80 ENST00000360962 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194457 c.529C>T p.Q177* Substitution - Nonsense unk 11:66555636-66555636 + Confirmed somatic variant NS NS Stage:I C11orf82 ENST00000329143 26351 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197158 c.736A>G p.T246A Substitution - Missense unk 11:82643116-82643116 + Confirmed somatic variant NS NS Stage:I C14orf20 ENST00000287913 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183518 c.244C>T p.H82Y Substitution - Missense unk 14:24675733-24675733 + Confirmed somatic variant NS NS Stage:I C14orf37 ENST00000267485 19846 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192749 c.1179T>C p.T393T Substitution - coding silent unk 14:58604898-58604898 - Confirmed somatic variant NS NS Stage:I C17orf28 ENST00000305419 15736 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195227 c.2042C>T p.T681M Substitution - Missense unk 17:72949111-72949111 - Confirmed somatic variant NS NS Stage:I C17orf66 ENST00000311880 26548 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185272 c.1446T>C p.Y482Y Substitution - coding silent unk 17:34182334-34182334 - Confirmed somatic variant NS NS Stage:I C1GALT1C1 NM_152692.3 24338 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202390 c.893C>T p.A298V Substitution - Missense unk 23:119760129-119760129 - Confirmed somatic variant NS NS Stage:I C1RL ENST00000266542 21265 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179703 c.1051delC p.L351fs*35 Deletion - Frameshift unk 12:7249400-7249400 - Confirmed somatic variant NS NS Stage:I C1orf172 ENST00000320567 26624 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184295 c.948G>A p.S316S Substitution - coding silent unk 1:27277924-27277924 - Confirmed somatic variant NS NS Stage:I C1orf31 ENST00000366613 18025 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210380 c.216C>T p.N72N Substitution - coding silent unk 1:234510069-234510069 + Confirmed somatic variant NS NS Stage:I C2orf3 ENST00000321027 1317 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196306 c.889G>A p.V297I Substitution - Missense unk 2:75921498-75921498 - Confirmed somatic variant NS NS Stage:I C2orf80 ENST00000341287 34352 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209775 c.315A>G p.E105E Substitution - coding silent unk 2:209045520-209045520 - Confirmed somatic variant NS NS Stage:I C3 ENST00000245907 1318 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179559 c.1611G>A p.L537L Substitution - coding silent unk 19:6710725-6710725 - Confirmed somatic variant NS NS Stage:I C3orf39 ENST00000344697 25902 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188574 c.1271G>A p.R424H Substitution - Missense unk 3:43121653-43121653 - Confirmed somatic variant NS NS Stage:I C3orf52 ENST00000264848 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201487 c.549T>C p.S183S Substitution - coding silent unk 3:111831892-111831892 + Confirmed somatic variant NS NS Stage:I C5 ENST00000223642 1331 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202794 c.1141C>T p.Q381* Substitution - Nonsense unk 9:123783948-123783948 - Confirmed somatic variant NS NS Stage:I C5AR1 ENST00000355085 1338 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191292 c.322G>A p.A108T Substitution - Missense unk 19:47823356-47823356 + Confirmed somatic variant NS NS Stage:I C6orf174 ENST00000368268 21494 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203510 c.2022G>A p.T674T Substitution - coding silent unk 6:127797149-127797149 - Confirmed somatic variant NS NS Stage:I C6orf174 ENST00000368268 21494 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203515 c.1110C>T p.I370I Substitution - coding silent unk 6:127836184-127836184 - Confirmed somatic variant NS NS Stage:I C6orf192 ENST00000275227 21573 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204262 c.1357C>T p.P453S Substitution - Missense unk 6:133091423-133091423 - Confirmed somatic variant NS NS Stage:I C6orf49 ENST00000335515 16805 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188269 c.1077T>C p.L359L Substitution - coding silent unk 6:41754789-41754789 + Confirmed somatic variant NS NS Stage:I C7orf44 ENST00000395879 21868 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188764 c.45G>A p.L15L Substitution - coding silent unk 7:43687204-43687204 - Confirmed somatic variant NS NS Stage:I C7orf63 ENST00000316089 26107 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198086 c.1686C>T p.I562I Substitution - coding silent unk 7:89917577-89917577 + Confirmed somatic variant NS NS Stage:I C7orf68 ENST00000257696 28859 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203518 c.105G>A p.S35S Substitution - coding silent unk 7:128097427-128097427 + Confirmed somatic variant NS NS Stage:I C9orf170 ENST00000375941 33817 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197941 c.9C>T p.S3S Substitution - coding silent unk 9:89763654-89763654 + Confirmed somatic variant NS NS Stage:I C9orf4 ENST00000374581 1362 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201143 c.660G>T p.R220S Substitution - Missense unk 9:111903825-111903825 - Confirmed somatic variant NS NS Stage:I C9orf79 ENST00000325643 26672 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198070 c.1575C>T p.A525A Substitution - coding silent unk 9:90500977-90500977 + Confirmed somatic variant NS NS Stage:I CACNA1C ENST00000402845 1390 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178414 c.6535G>A p.A2179T Substitution - Missense unk 12:2800144-2800144 + Confirmed somatic variant NS NS Stage:I CACNA1C_ENST00000344100 ENST00000344100 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178415 c.6319G>A p.A2107T Substitution - Missense unk 12:2800144-2800144 + Confirmed somatic variant NS NS Stage:I CACNA1S ENST00000362061 1397 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209464 c.409G>A p.V137M Substitution - Missense unk 1:201061232-201061232 - Confirmed somatic variant NS NS Stage:I CACNB2 ENST00000377319 1402 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182350 c.1715G>A p.R572H Substitution - Missense unk 10:18828550-18828550 + Confirmed somatic variant NS NS Stage:I CACNB3 ENST00000301050 1403 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189962 c.948C>T p.T316T Substitution - coding silent unk 12:49220595-49220595 + Confirmed somatic variant NS NS Stage:I CADPS2 ENST00000334010 16018 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202693 c.551G>A p.R184H Substitution - Missense unk 7:122303526-122303526 - Confirmed somatic variant NS NS Stage:I CAMSAP1L1 ENST00000358823 29188 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209447 c.1166G>A p.R389H Substitution - Missense unk 1:200816394-200816394 + Confirmed somatic variant NS NS Stage:I CAPN11 ENST00000398776 1478 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188961 c.1231C>A p.H411N Substitution - Missense unk 6:44144729-44144729 + Confirmed somatic variant NS NS Stage:I CARD9 NM_052813.2 16391 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204818 c.1070G>A p.R357Q Substitution - Missense unk 9:139264209-139264209 - Confirmed somatic variant NS NS Stage:I CASK NM_003688 1497 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188099 c.1559A>G p.H520R Substitution - Missense unk 23:41428944-41428944 - Confirmed somatic variant NS NS Stage:I CASP10 NM_032977.2 1500 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209539 c.648C>T p.S216S Substitution - coding silent unk 2:202060635-202060635 + Confirmed somatic variant NS NS Stage:I CASP9 NM_001229.2 1511 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181671 c.578G>A p.R193H Substitution - Missense unk 1:15833446-15833446 - Confirmed somatic variant NS NS Stage:I CASZ1 ENST00000377022 26002 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180694 c.233G>A p.R78H Substitution - Missense unk 1:10725412-10725412 - Confirmed somatic variant NS NS Stage:I CATSPERB ENST00000256343 20500 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198273 c.1406G>A p.R469H Substitution - Missense unk 14:92126207-92126207 - Confirmed somatic variant NS NS Stage:I CC2D1A ENST00000318003 30237 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181318 c.2813G>T p.R938M Substitution - Missense unk 19:14041080-14041080 + Confirmed somatic variant NS NS Stage:I CCDC105 ENST00000292574 26866 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181512 c.222C>T p.R74R Substitution - coding silent unk 19:15121859-15121859 + Confirmed somatic variant NS NS Stage:I CCDC108 ENST00000341552 25325 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210037 c.2519G>A p.C840Y Substitution - Missense unk 2:219888813-219888813 - Confirmed somatic variant NS NS Stage:I CCDC150 ENST00000389175 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209382 c.160G>A p.D54N Substitution - Missense unk 2:197511212-197511212 + Confirmed somatic variant NS NS Stage:I CCDC22 NM_014008.1 28909 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190436 c.235G>A p.G79S Substitution - Missense unk 23:49098488-49098488 + Confirmed somatic variant NS NS Stage:I CCDC39 ENST00000273654 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208850 c.1689G>A p.A563A Substitution - coding silent unk 3:180364957-180364957 - Confirmed somatic variant NS NS Stage:I CCDC39_ENST00000442201 ENST00000442201 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208851 c.1437G>A p.A479A Substitution - coding silent unk 3:180364957-180364957 - Confirmed somatic variant NS NS Stage:I CCDC60 ENST00000327554 28610 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202217 c.1558C>T p.R520* Substitution - Nonsense unk 12:119978425-119978425 + Confirmed somatic variant NS NS Stage:I CCDC77 ENST00000239830 28203 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 177982 c.741C>T p.I247I Substitution - coding silent unk 12:542408-542408 + Confirmed somatic variant NS NS Stage:I CCDC97 ENST00000269967 28289 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189600 c.331T>G p.F111V Substitution - Missense unk 19:41822573-41822573 + Confirmed somatic variant NS NS Stage:I CCL21 ENST00000259607 10620 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186168 c.144C>T p.Y48Y Substitution - coding silent unk 9:34709818-34709818 - Confirmed somatic variant NS NS Stage:I CCNE1 NM_001238.1 1589 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186227 c.1220C>T p.P407L Substitution - Missense unk 19:30314671-30314671 + Confirmed somatic variant NS NS Stage:I CCNT2 NM_058241.1 1600 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204558 c.877A>G p.T293A Substitution - Missense unk 2:135710902-135710902 + Confirmed somatic variant NS NS Stage:I CCR9 NM_031200.1 1610 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189450 c.897C>T p.F299F Substitution - coding silent unk 3:45943177-45943177 + Confirmed somatic variant NS NS Stage:I CD101 ENST00000369470 5949 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202057 c.2004C>T p.A668A Substitution - coding silent unk 1:117561169-117561169 + Confirmed somatic variant NS NS Stage:I CD163L1 ENST00000313599 30375 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179786 c.1682G>A p.G561E Substitution - Missense unk 12:7550907-7550907 - Confirmed somatic variant NS NS Stage:I CD55 NM_000574.2 2665 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209688 c.707T>A p.I236N Substitution - Missense unk 1:207504495-207504495 + Confirmed somatic variant NS NS Stage:I CDC25A NM_001789.2 1725 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190130 c.951C>T p.S317S Substitution - coding silent unk 3:48209414-48209414 - Confirmed somatic variant NS NS Stage:I CDC42BPG_ENST00000342711 ENST00000342711 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194081 c.4208G>A p.R1403H Substitution - Missense unk 11:64594813-64594813 - Confirmed somatic variant NS NS Stage:I CDH6 ENST00000265071 1765 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185325 c.2022C>T p.I674I Substitution - coding silent unk 5:31323064-31323064 + Confirmed somatic variant NS NS Stage:I CDHR5 ENST00000358353 7521 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178022 c.2406C>T p.D802D Substitution - coding silent unk 11:617483-617483 - Confirmed somatic variant NS NS Stage:I CDK5R2 NM_003936.3 1776 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210034 c.780C>T p.A260A Substitution - coding silent unk 2:219825322-219825322 + Confirmed somatic variant NS NS Stage:I CDK5RAP2 NM_018249.4 18672 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202709 c.3741G>A p.Q1247Q Substitution - coding silent unk 9:123199787-123199787 - Confirmed somatic variant NS NS Stage:I CDKAL1 ENST00000378610 21050 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182779 c.108G>A p.P36P Substitution - coding silent unk 6:20546689-20546689 + Confirmed somatic variant NS NS Stage:I CDYL2 ENST00000299564 23030 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196882 c.989G>A p.R330Q Substitution - Missense unk 16:80654678-80654678 - Confirmed somatic variant NS NS Stage:I CEACAM5 ENST00000221992 1817 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189753 c.1938G>A p.T646T Substitution - coding silent unk 19:42225008-42225008 + Confirmed somatic variant NS NS Stage:I CECR2 ENST00000400585 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181805 c.4230C>T p.V1410V Substitution - coding silent unk 22:18031734-18031734 + Confirmed somatic variant NS NS Stage:I CELSR1 ENST00000262738 1850 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189267 c.1872delC p.T625fs*43 Deletion - Frameshift unk 22:46931196-46931196 - Confirmed somatic variant NS NS Stage:I CENPF ENST00000366955 1857 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209876 c.8412G>A p.Q2804Q Substitution - coding silent unk 1:214828673-214828673 + Confirmed somatic variant NS NS Stage:I CENPO ENST00000380834 28152 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183848 c.280T>C p.L94L Substitution - coding silent unk 2:25037308-25037308 + Confirmed somatic variant NS NS Stage:I CEP192 ENST00000325971 25515 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181162 c.1012C>T p.Q338* Substitution - Nonsense unk 18:13049590-13049590 + Confirmed somatic variant NS NS Stage:I CEP192 ENST00000325971 25515 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181175 c.5602C>T p.R1868* Substitution - Nonsense unk 18:13116476-13116476 + Confirmed somatic variant NS NS Stage:I CEP192_ENST00000506447 ENST00000506447 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181163 c.2800C>T p.Q934* Substitution - Nonsense unk 18:13049590-13049590 + Confirmed somatic variant NS NS Stage:I CEP192_ENST00000506447 ENST00000506447 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181176 c.7390C>T p.R2464* Substitution - Nonsense unk 18:13116476-13116476 + Confirmed somatic variant NS NS Stage:I CEP63 ENST00000337090 25815 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204618 c.961T>C p.Y321H Substitution - Missense unk 3:134266208-134266208 + Confirmed somatic variant NS NS Stage:I CFI ENST00000394634 5394 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201139 c.1434C>T p.N478N Substitution - coding silent unk 4:110663747-110663747 - Confirmed somatic variant NS NS Stage:I CFP NM_002621.1 8864 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189927 c.748G>A p.G250S Substitution - Missense unk 23:47486558-47486558 - Confirmed somatic variant NS NS Stage:I CHD7 ENST00000307121 20626 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193510 c.1131C>T p.N377N Substitution - coding silent unk 8:61655122-61655122 + Confirmed somatic variant NS NS Stage:I CHDH ENST00000315251 24288 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191586 c.1701A>G p.A567A Substitution - coding silent unk 3:53851888-53851888 - Confirmed somatic variant NS NS Stage:I CHERP ENST00000198939 16930 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181831 c.525C>T p.A175A Substitution - coding silent unk 19:16643558-16643558 - Confirmed somatic variant NS NS Stage:I CHI3L1 ENST00000255409 1932 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209521 c.729C>T p.Y243Y Substitution - coding silent unk 1:203149763-203149763 - Confirmed somatic variant NS NS Stage:I CHRM1 ENST00000306960 1950 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193666 c.151A>G p.K51E Substitution - Missense unk 11:62678422-62678422 - Confirmed somatic variant NS NS Stage:I CHRNA2 ENST00000240132 1956 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184368 c.1253A>T p.E418V Substitution - Missense unk 8:27320707-27320707 - Confirmed somatic variant NS NS Stage:I CHRND ENST00000258385 1965 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210391 c.1400G>A p.R467H Substitution - Missense unk 2:233399868-233399868 + Confirmed somatic variant NS NS Stage:I CIC ENST00000160740 14214 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189956 c.3302C>T p.A1101V Substitution - Missense unk 19:42796844-42796844 + Confirmed somatic variant NS NS Stage:I CILP2 ENST00000291495 24213 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182505 c.1521C>T p.G507G Substitution - coding silent unk 19:19654875-19654875 + Confirmed somatic variant NS NS Stage:I CIZ1 ENST00000372938 16744 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203821 c.1712G>A p.R571H Substitution - Missense unk 9:130939951-130939951 - Confirmed somatic variant NS NS Stage:I CKAP5 ENST00000354558 28959 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189693 c.4994T>C p.I1665T Substitution - Missense unk 11:46774923-46774923 - Confirmed somatic variant NS NS Stage:I CKM ENST00000221476 1994 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190856 c.214G>A p.V72M Substitution - Missense unk 19:45821217-45821217 - Confirmed somatic variant NS NS Stage:I CLCN5 NM_000084.1 2023 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190681 c.2126G>A p.R709Q Substitution - Missense unk 23:49855519-49855519 + Confirmed somatic variant NS NS Stage:I CLCN6 ENST00000346436 2024 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180922 c.1901C>T p.P634L Substitution - Missense unk 1:11896131-11896131 + Confirmed somatic variant NS NS Stage:I CLCN7 ENST00000262318 2025 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178180 c.211C>T p.P71S Substitution - Missense unk 16:1515270-1515270 - Confirmed somatic variant NS NS Stage:I CLDND2 ENST00000291715 28511 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192457 c.98G>A p.R33H Substitution - Missense unk 19:51871734-51871734 - Confirmed somatic variant NS NS Stage:I CLSTN2 ENST00000332210 17448 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205367 c.873C>T p.A291A Substitution - coding silent unk 3:140167446-140167446 + Confirmed somatic variant NS NS Stage:I CLTCL1 ENST00000263200 2093 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182039 c.2338C>T p.R780C Substitution - Missense unk 22:19210287-19210287 - Confirmed somatic variant NS NS Stage:I CLUL1 ENST00000338387 2096 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178023 c.60C>T p.C20C Substitution - coding silent unk 18:618060-618060 + Confirmed somatic variant NS NS Stage:I CNGB1 ENST00000251102 2151 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192451 c.803C>T p.P268L Substitution - Missense unk 16:57992348-57992348 - Confirmed somatic variant NS NS Stage:I CNTN6 ENST00000397479 2176 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178156 c.1341G>A p.T447T Substitution - coding silent unk 3:1371596-1371596 + Confirmed somatic variant NS NS Stage:I CNTN6 ENST00000397479 2176 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178173 c.2416C>T p.P806S Substitution - Missense unk 3:1424991-1424991 + Confirmed somatic variant NS NS Stage:I CNTNAP5 ENST00000285362 18748 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203155 c.1305C>T p.R435R Substitution - coding silent unk 2:125262114-125262114 + Confirmed somatic variant NS NS Stage:I COG3 ENST00000349995 18619 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189151 c.1085A>G p.H362R Substitution - Missense unk 13:46065663-46065663 + Confirmed somatic variant NS NS Stage:I COG4 ENST00000323786 18620 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194843 c.1544G>A p.R515H Substitution - Missense unk 16:70530272-70530272 - Confirmed somatic variant NS NS Stage:I COL12A1 ENST00000322507 2188 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196336 c.4485G>A p.Q1495Q Substitution - coding silent unk 6:75855893-75855893 - Confirmed somatic variant NS NS Stage:I COL1A2 ENST00000297268 2198 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198531 c.20C>T p.T7M Substitution - Missense unk 7:94024363-94024363 + Confirmed somatic variant NS NS Stage:I COL5A1 ENST00000371817 2209 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204692 c.3732C>T p.D1244D Substitution - coding silent unk 9:137704336-137704336 + Confirmed somatic variant NS NS Stage:I COL5A2 ENST00000374866 2210 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209212 c.4412G>A p.R1471H Substitution - Missense unk 2:189898884-189898884 - Confirmed somatic variant NS NS Stage:I COL7A1 ENST00000328333 2214 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190268 c.2104G>A p.V702I Substitution - Missense unk 3:48627098-48627098 - Confirmed somatic variant NS NS Stage:I COL7A1 ENST00000328333 2214 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190269 c.630C>T p.L210L Substitution - coding silent unk 3:48630587-48630587 - Confirmed somatic variant NS NS Stage:I CPA4 ENST00000222482 15740 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203775 c.713G>A p.W238* Substitution - Nonsense unk 7:129948157-129948157 + Confirmed somatic variant NS NS Stage:I CRBN ENST00000231948 30185 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178617 c.162G>A p.P54P Substitution - coding silent unk 3:3216859-3216859 - Confirmed somatic variant NS NS Stage:I CREBBP NM_004380.1 2348 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178803 c.2278C>T p.P760S Substitution - Missense unk 16:3824575-3824575 - Confirmed somatic variant NS NS Stage:I CRKL NM_005207.2 2363 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182541 c.845G>A p.R282H Substitution - Missense unk 22:21304066-21304066 + Confirmed somatic variant NS NS Stage:I CRYAA NM_000394.2 2388 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188693 c.321C>T p.H107H Substitution - coding silent unk 21:44592189-44592189 + Confirmed somatic variant NS NS Stage:I CRYBA4 ENST00000354760 2396 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183948 c.284G>A p.R95Q Substitution - Missense unk 22:27021570-27021570 + Confirmed somatic variant NS NS Stage:I CRYBB1 ENST00000215939 2397 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183940 c.331G>A p.G111R Substitution - Missense unk 22:27003954-27003954 - Confirmed somatic variant NS NS Stage:I CRYBB1 ENST00000215939 2397 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183941 c.230C>T p.S77L Substitution - Missense unk 22:27008105-27008105 - Confirmed somatic variant NS NS Stage:I CRYGB ENST00000260988 2409 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 149050 c.94C>T p.R32C Substitution - Missense unk 2:209010656-209010656 - Confirmed somatic variant NS NS Stage:I CSPG4 NM_001897.3 2466 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195944 c.6547C>T p.R2183W Substitution - Missense unk 15:75968313-75968313 - Confirmed somatic variant NS NS Stage:I CTNNA2 NM_004389.1 2510 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196969 c.954C>T p.A318A Substitution - coding silent unk 2:80136821-80136821 + Confirmed somatic variant NS NS Stage:I CTNNA2_ENST00000466387 ENST00000466387 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196968 c.954C>T p.A318A Substitution - coding silent unk 2:80136821-80136821 + Confirmed somatic variant NS NS Stage:I CTSC ENST00000227266 2528 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197749 c.291T>C p.N97N Substitution - coding silent unk 11:88068132-88068132 - Confirmed somatic variant NS NS Stage:I CUL5 NM_003478.2 2556 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200625 c.772G>A p.V258I Substitution - Missense unk 11:107925674-107925674 + Confirmed somatic variant NS NS Stage:I CXCL11 NM_005409.3 10638 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196592 c.22A>G p.I8V Substitution - Missense unk 4:76957119-76957119 - Confirmed somatic variant NS NS Stage:I CYB5R4 ENST00000369681 20147 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197407 c.1313G>A p.S438N Substitution - Missense unk 6:84650287-84650287 + Confirmed somatic variant NS NS Stage:I CYLD NM_015247.1 2584 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190565 c.1542G>A p.T514T Substitution - coding silent unk 16:50815180-50815180 + Confirmed somatic variant NS NS Stage:I CYP19A1 ENST00000396402 2594 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190538 c.1426G>A p.D476N Substitution - Missense unk 15:51503091-51503091 - Confirmed somatic variant NS NS Stage:I CYP27B1 ENST00000228606 2606 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192422 c.695C>T p.T232M Substitution - Missense unk 12:58158889-58158889 - Confirmed somatic variant NS NS Stage:I CYP2C8 NM_000770.2 2622 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198941 c.573T>C p.D191D Substitution - coding silent unk 10:96824626-96824626 - Confirmed somatic variant NS NS Stage:I CYP46A1 ENST00000261835 2641 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199298 c.411G>A p.Q137Q Substitution - coding silent unk 14:100166406-100166406 + Confirmed somatic variant NS NS Stage:I CYP4V2 ENST00000378802 23198 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209115 c.1339G>A p.E447K Substitution - Missense unk 4:187130360-187130360 + Confirmed somatic variant NS NS Stage:I CYP51A1 ENST00000003100 2649 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198329 c.206A>G p.Y69C Substitution - Missense unk 7:91761173-91761173 - Confirmed somatic variant NS NS Stage:I DCHS1 ENST00000299441 13681 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179531 c.4814G>T p.R1605L Substitution - Missense unk 11:6651124-6651124 - Confirmed somatic variant NS NS Stage:I DCTD ENST00000312820 2710 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208919 c.240G>A p.P80P Substitution - coding silent unk 4:183836080-183836080 - Confirmed somatic variant NS NS Stage:I DDI1 ENST00000302259 18961 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200181 c.181C>A p.L61M Substitution - Missense unk 11:103907731-103907731 + Confirmed somatic variant NS NS Stage:I DDI1_ENST00000302259 ENST00000302259_v62 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200182 c.181C>A p.L61M Substitution - Missense unk 11:103907731-103907731 + Confirmed somatic variant NS NS Stage:I DDOST ENST00000375048 2728 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182810 c.1332C>T p.I444I Substitution - coding silent unk 1:20978911-20978911 - Confirmed somatic variant NS NS Stage:I DDX50 ENST00000373585 17906 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195192 c.1051G>A p.V351I Substitution - Missense unk 10:70673922-70673922 + Confirmed somatic variant NS NS Stage:I DERA ENST00000428559 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181744 c.712C>T p.R238W Substitution - Missense unk 12:16185550-16185550 + Confirmed somatic variant NS NS Stage:I DIAPH3 ENST00000400324 15480 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193005 c.2643G>A p.T881T Substitution - coding silent unk 13:60435635-60435635 - Confirmed somatic variant NS NS Stage:I DIDO1 ENST00000395343 2680 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193318 c.1169A>C p.E390A Substitution - Missense unk 20:61538704-61538704 - Confirmed somatic variant NS NS Stage:I DIP2C ENST00000280886 29150 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 177998 c.918C>T p.R306R Substitution - coding silent unk 10:459992-459992 - Confirmed somatic variant NS NS Stage:I DISC1_ENST00000366638 ENST00000366638 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210329 c.2647G>A p.E883K Substitution - Missense unk 1:232172563-232172563 + Confirmed somatic variant NS NS Stage:I DMPK NM_004409 2933 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190956 c.1074C>T p.F358F Substitution - coding silent unk 19:46280657-46280657 - Confirmed somatic variant NS NS Stage:I DMPK_ENST00000343373 ENST00000343373 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190957 c.1104C>T p.F368F Substitution - coding silent unk 19:46280657-46280657 - Confirmed somatic variant NS NS Stage:I DNAH12 ENST00000351747 2943 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192718 c.1196C>T p.A399V Substitution - Missense unk 3:57488097-57488097 - Confirmed somatic variant NS NS Stage:I DNAH12L ENST00000311202 2943 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192717 c.1196C>T p.A399V Substitution - Missense unk 3:57488097-57488097 - Confirmed somatic variant NS NS Stage:I DNAH3 ENST00000261383 2949 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182833 c.8957G>A p.R2986Q Substitution - Missense unk 16:20976249-20976249 - Confirmed somatic variant NS NS Stage:I DNAH3 ENST00000261383 2949 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182835 c.8804G>A p.R2935Q Substitution - Missense unk 16:20976402-20976402 - Confirmed somatic variant NS NS Stage:I DNAH3_ENST00000261383 ENST00000261383_v62 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182834 c.8957G>A p.R2986Q Substitution - Missense unk 16:20976249-20976249 - Confirmed somatic variant NS NS Stage:I DNAH3_ENST00000261383 ENST00000261383_v62 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182836 c.8804G>A p.R2935Q Substitution - Missense unk 16:20976402-20976402 - Confirmed somatic variant NS NS Stage:I DNAH9 ENST00000262442 2953 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180901 c.11351C>T p.T3784M Substitution - Missense unk 17:11797758-11797758 + Confirmed somatic variant NS NS Stage:I DNAJC24 ENST00000395949 26979 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185334 c.383C>A p.A128E Substitution - Missense unk 11:31451881-31451881 + Confirmed somatic variant NS NS Stage:I DNASE1L3 ENST00000394549 2959 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192866 c.392C>A p.S131Y Substitution - Missense unk 3:58190537-58190537 - Confirmed somatic variant NS NS Stage:I DNM1L ENST00000266481 2973 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185758 c.1689C>G p.S563R Substitution - Missense unk 12:32891212-32891212 + Confirmed somatic variant NS NS Stage:I DNM2 ENST00000359692 2974 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180718 c.2144G>A p.R715Q Substitution - Missense unk 19:10939809-10939809 + Confirmed somatic variant NS NS Stage:I DNMT1 NM_001379.1 2976 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180519 c.1660G>C p.A554P Substitution - Missense unk 19:10265386-10265386 - Confirmed somatic variant NS NS Stage:I DNMT3B NM_006892.3 2979 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185168 c.561C>A p.P187P Substitution - coding silent unk 20:31375164-31375164 + Confirmed somatic variant NS NS Stage:I DNMT3B_ENST00000201963 ENST00000201963 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185169 c.597C>A p.P199P Substitution - coding silent unk 20:31375164-31375164 + Confirmed somatic variant NS NS Stage:I DNTTIP2 ENST00000436063 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198584 c.274T>C p.S92P Substitution - Missense unk 1:94343217-94343217 - Confirmed somatic variant NS NS Stage:I DOCK5 ENST00000276440 23476 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183936 c.5137G>A p.A1713T Substitution - Missense unk 8:25265542-25265542 + Confirmed somatic variant NS NS Stage:I DPYSL2 ENST00000311151 3014 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184158 c.802C>T p.R268W Substitution - Missense unk 8:26492407-26492407 + Confirmed somatic variant NS NS Stage:I DSG3 ENST00000257189 3050 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184343 c.2762C>A p.S921Y Substitution - Missense unk 18:29055985-29055985 + Confirmed somatic variant NS NS Stage:I DUOX1 ENST00000389037 3062 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188612 c.465C>T p.T155T Substitution - coding silent unk 15:45427459-45427459 + Confirmed somatic variant NS NS Stage:I DVL2 NM_004422.2 3086 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179685 c.766G>A p.V256I Substitution - Missense unk 17:7132748-7132748 - Confirmed somatic variant NS NS Stage:I DYDC1 ENST00000372202 23460 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197132 c.403G>A p.A135T Substitution - Missense unk 10:82098324-82098324 - Confirmed somatic variant NS NS Stage:I DYNC1H1 ENST00000360184 2961 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199819 c.3876C>T p.D1292D Substitution - coding silent unk 14:102466397-102466397 + Confirmed somatic variant NS NS Stage:I DYNC1I1 ENST00000324972 2963 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198807 c.1095T>A p.I365I Substitution - coding silent unk 7:95657561-95657561 + Confirmed somatic variant NS NS Stage:I DYNC1I2 ENST00000410079 2964 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208088 c.1873C>T p.R625* Substitution - Nonsense unk 2:172604355-172604355 + Confirmed somatic variant NS NS Stage:I DYNC2H1 ENST00000334267 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200029 c.2137C>T p.R713W Substitution - Missense unk 11:103005080-103005080 + Confirmed somatic variant NS NS Stage:I DYRK3 NM_003582 3094 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209666 c.1154G>A p.C385Y Substitution - Missense unk 1:206821802-206821802 + Confirmed somatic variant NS NS Stage:I DYRK3_ENST00000367109 ENST00000367109 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209667 c.1259G>A p.C420Y Substitution - Missense unk 1:206821802-206821802 + Confirmed somatic variant NS NS Stage:I DYSF ENST00000258104 3097 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195560 c.3597G>T p.W1199C Substitution - Missense unk 2:71825770-71825770 + Confirmed somatic variant NS NS Stage:I EBP NM_006579.1 3133 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190152 c.511C>T p.R171C Substitution - Missense unk 23:48386663-48386663 + Confirmed somatic variant NS NS Stage:I EEF2 ENST00000309311 3214 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178836 c.1445C>T p.T482M Substitution - Missense unk 19:3979966-3979966 - Confirmed somatic variant NS NS Stage:I EFHC2 NM_025184.2 26233 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188879 c.409A>T p.T137S Substitution - Missense unk 23:44120518-44120518 - Confirmed somatic variant NS NS Stage:I EGR1 ENST00000239938 3238 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204765 c.450G>A p.W150* Substitution - Nonsense unk 5:137802588-137802588 + Confirmed somatic variant NS NS Stage:I EGR3 ENST00000317216 3240 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183213 c.457C>A p.L153I Substitution - Missense unk 8:22548693-22548693 - Confirmed somatic variant NS NS Stage:I EIF3D ENST00000216190 3278 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186299 c.317G>A p.R106H Substitution - Missense unk 22:36920017-36920017 - Confirmed somatic variant NS NS Stage:I EIF3J ENST00000261868 3270 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188443 c.596T>A p.I199N Substitution - Missense unk 15:44852471-44852471 + Confirmed somatic variant NS NS Stage:I ELMO3 ENST00000393997 17289 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194363 c.2235C>T p.N745N Substitution - coding silent unk 16:67237693-67237693 + Confirmed somatic variant NS NS Stage:I ELTD1 ENST00000370742 20822 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196856 c.1893G>T p.W631C Substitution - Missense unk 1:79357326-79357326 - Confirmed somatic variant NS NS Stage:I EME1 NM_152463.1 24965 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189409 c.794G>A p.G265D Substitution - Missense unk 17:48453445-48453445 + Confirmed somatic variant NS NS Stage:I ENPP2 NM_006209.2 3357 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202517 c.880A>G p.T294A Substitution - Missense unk 8:120613656-120613656 - Confirmed somatic variant NS NS Stage:I ENSG00000132356 ENST00000354209 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187949 c.1129C>A p.L377I Substitution - Missense unk 5:40765078-40765078 - Confirmed somatic variant NS NS Stage:I ENSG00000250423 ENST00000402510 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202154 c.1782G>T p.M594I Substitution - Missense unk 23:118223411-118223411 - Confirmed somatic variant NS NS Stage:I EP300 NM_001429.1 3373 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187712 c.3653A>G p.D1218G Substitution - Missense unk 22:41556708-41556708 + Confirmed somatic variant NS NS Stage:I EPB41L3 ENST00000341928 3380 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179191 c.1294C>T p.R432C Substitution - Missense unk 18:5423422-5423422 - Confirmed somatic variant NS NS Stage:I EPB41L3 ENST00000341928 3380 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179193 c.897T>A p.D299E Substitution - Missense unk 18:5433483-5433483 - Confirmed somatic variant NS NS Stage:I EPG5 ENST00000282041 29331 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188228 c.4542G>A p.P1514P Substitution - coding silent unk 18:43481065-43481065 - Confirmed somatic variant NS NS Stage:I EPHB6 NM_004445 3396 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205418 c.1154A>G p.D385G Substitution - Missense unk 7:142563811-142563811 + Confirmed somatic variant NS NS Stage:I EPM2AIP1 ENST00000322716 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186799 c.1080G>A p.A360A Substitution - coding silent unk 3:37033489-37033489 - Confirmed somatic variant NS NS Stage:I EPM2AIP1 ENST00000322716 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186800 c.502C>T p.R168* Substitution - Nonsense unk 3:37034067-37034067 - Confirmed somatic variant NS NS Stage:I EPN3 ENST00000268933 18235 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189465 c.373G>A p.E125K Substitution - Missense unk 17:48614290-48614290 + Confirmed somatic variant NS NS Stage:I ERF NM_006494.1 3444 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189946 c.502T>C p.S168P Substitution - Missense unk 19:42753762-42753762 - Confirmed somatic variant NS NS Stage:I ESX1 NM_153448.2 14865 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200174 c.683C>T p.A228V Substitution - Missense unk 23:103495447-103495447 - Confirmed somatic variant NS NS Stage:I EVC ENST00000264956 3497 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179274 c.219G>A p.A73A Substitution - coding silent unk 4:5721019-5721019 + Confirmed somatic variant NS NS Stage:I EXOC6 ENST00000260762 23196 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198652 c.411T>C p.P137P Substitution - coding silent unk 10:94654776-94654776 + Confirmed somatic variant NS NS Stage:I EXOC6_ENST00000371552 ENST00000371552 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198653 c.396T>C p.P132P Substitution - coding silent unk 10:94654776-94654776 + Confirmed somatic variant NS NS Stage:I EXOC7 ENST00000357231 23214 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195544 c.241C>T p.L81L Substitution - coding silent unk 17:74097830-74097830 - Confirmed somatic variant NS NS Stage:I EXPH5 ENST00000265843 30578 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200715 c.5279C>A p.P1760H Substitution - Missense unk 11:108380955-108380955 - Confirmed somatic variant NS NS Stage:I EYA3 ENST00000373871 3521 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184582 c.159T>C p.I53I Substitution - coding silent unk 1:28365415-28365415 - Confirmed somatic variant NS NS Stage:I F5 ENST00000367797 3542 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207760 c.4310C>T p.T1437I Substitution - Missense unk 1:169510018-169510018 - Confirmed somatic variant NS NS Stage:I FA2H ENST00000219368 21197 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195853 c.338G>A p.R113Q Substitution - Missense unk 16:74773946-74773946 - Confirmed somatic variant NS NS Stage:I FAM116A ENST00000311128 26635 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192739 c.1313G>A p.R438H Substitution - Missense unk 3:57619032-57619032 - Confirmed somatic variant NS NS Stage:I FAM120A ENST00000277165 13247 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198773 c.1650C>T p.P550P Substitution - coding silent unk 9:96291778-96291778 + Confirmed somatic variant NS NS Stage:I FAM163A ENST00000341785 28274 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208327 c.104G>A p.C35Y Substitution - Missense unk 1:179782924-179782924 + Confirmed somatic variant NS NS Stage:I FAM164C ENST00000238686 20354 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196133 c.1141G>A p.G381S Substitution - Missense unk 14:75538417-75538417 + Confirmed somatic variant NS NS Stage:I FAM183A_ENST00000335282 ENST00000335282_v65 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188665 c.78G>T p.K26N Substitution - Missense unk 1:43613700-43613700 + Confirmed somatic variant NS NS Stage:I FAM198B ENST00000296530 25312 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207310 c.566G>A p.R189Q Substitution - Missense unk 4:159091962-159091962 - Confirmed somatic variant NS NS Stage:I FAM198B_ENST00000417442 ENST00000417442 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207311 c.566G>A p.R189Q Substitution - Missense unk 4:159091962-159091962 - Confirmed somatic variant NS NS Stage:I FAM199X NM_207318.1 25195 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200158 c.105C>T p.S35S Substitution - coding silent unk 23:103411571-103411571 + Confirmed somatic variant NS NS Stage:I FAM199X NM_207318.1 25195 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200165 c.466A>G p.I156V Substitution - Missense unk 23:103430795-103430795 + Confirmed somatic variant NS NS Stage:I FAM54A ENST00000275229 21115 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204669 c.869G>A p.R290Q Substitution - Missense unk 6:136560604-136560604 - Confirmed somatic variant NS NS Stage:I FAM5B ENST00000361539 13746 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208223 c.2124T>C p.Y708Y Substitution - coding silent unk 1:177250436-177250436 + Confirmed somatic variant NS NS Stage:I FAM71C ENST00000324341 28594 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199180 c.224G>A p.R75H Substitution - Missense unk 12:100042176-100042176 + Confirmed somatic variant NS NS Stage:I FAM83G ENST00000345041 32554 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182342 c.241C>A p.P81T Substitution - Missense unk 17:18907114-18907114 - Confirmed somatic variant NS NS Stage:I FAM84A ENST00000295092 20743 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181446 c.209G>A p.R70H Substitution - Missense unk 2:14774312-14774312 + Confirmed somatic variant NS NS Stage:I FAM96A ENST00000300030 26235 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193588 c.316C>T p.R106* Substitution - Nonsense unk 15:64373324-64373324 - Confirmed somatic variant NS NS Stage:I FARP1 NM_005766.2 3591 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199072 c.398G>T p.R133M Substitution - Missense unk 13:99020449-99020449 + Confirmed somatic variant NS NS Stage:I FBF1 XM_371079.2 24674 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195492 c.2201C>T p.T734M Substitution - Missense unk 17:73914246-73914246 - Confirmed somatic variant NS NS Stage:I FBLN1 ENST00000327858 3600 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188977 c.1685G>A p.R562H Substitution - Missense unk 22:45946483-45946483 + Confirmed somatic variant NS NS Stage:I FBXL14 NM_152441.1 28624 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178218 c.884A>C p.Q295P Substitution - Missense unk 12:1702349-1702349 - Confirmed somatic variant NS NS Stage:I FBXL19_ENST00000380310 ENST00000380310 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185173 c.743T>C p.L248P Substitution - Missense unk 16:30939843-30939843 + Confirmed somatic variant NS NS Stage:I FBXL7 NM_012304.3 13604 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181724 c.772C>T p.R258W Substitution - Missense unk 5:15936591-15936591 + Confirmed somatic variant NS NS Stage:I FBXO10 XM_291314.4 13589 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186956 c.1930G>A p.A644T Substitution - Missense unk 9:37522822-37522822 - Confirmed somatic variant NS NS Stage:I FBXO18 NM_032807.3 13620 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179340 c.121G>A p.A41T Substitution - Missense unk 10:5937117-5937117 + Confirmed somatic variant NS NS Stage:I FCGBP ENST00000221347 13572 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189181 c.13809G>T p.A4603A Substitution - coding silent unk 19:40366425-40366425 - Confirmed somatic variant NS NS Stage:I FGD5 NM_152536.2 19117 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181496 c.1869G>A p.S623S Substitution - coding silent unk 3:14905701-14905701 + Confirmed somatic variant NS NS Stage:I FLCN NM_144997.3 27310 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181933 c.751T>A p.W251R Substitution - Missense unk 17:17125843-17125843 - Confirmed somatic variant NS NS Stage:I FLG ENST00000368799 3748 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206119 c.9331C>T p.R3111C Substitution - Missense unk 1:152278031-152278031 - Confirmed somatic variant NS NS Stage:I FLG2 ENST00000388718 33276 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206148 c.2849A>G p.Q950R Substitution - Missense unk 1:152327413-152327413 - Confirmed somatic variant NS NS Stage:I FLJ16369 ENST00000250479 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183206 c.498C>T p.D166D Substitution - coding silent unk 14:23511932-23511932 + Confirmed somatic variant NS NS Stage:I FLNB ENST00000295956 3755 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192838 c.1842C>T p.G614G Substitution - coding silent unk 3:58092501-58092501 + Confirmed somatic variant NS NS Stage:I FLNB ENST00000295956 3755 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192843 c.4150A>G p.S1384G Substitution - Missense unk 3:58112417-58112417 + Confirmed somatic variant NS NS Stage:I FLT1 NM_002019 3763 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184524 c.593C>T p.T198M Substitution - Missense unk 13:29008278-29008278 - Confirmed somatic variant NS NS Stage:I FNDC1 ENST00000297267 21184 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207339 c.3805G>A p.V1269M Substitution - Missense unk 6:159655349-159655349 + Confirmed somatic variant NS NS Stage:I FNDC3A ENST00000337156 20296 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190272 c.845T>C p.V282A Substitution - Missense unk 13:49719939-49719939 + Confirmed somatic variant NS NS Stage:I FOLR1 ENST00000393676 3791 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195536 c.293G>A p.R98Q Substitution - Missense unk 11:71906439-71906439 + Confirmed somatic variant NS NS Stage:I FREM1 ENST00000380881 23399 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181481 c.1640G>T p.R547L Substitution - Missense unk 9:14842415-14842415 - Confirmed somatic variant NS NS Stage:I FRY ENST00000380250 20367 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185404 c.3925G>A p.G1309S Substitution - Missense unk 13:32776571-32776571 + Confirmed somatic variant NS NS Stage:I FSCN3 ENST00000265825 3961 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203414 c.853C>T p.R285C Substitution - Missense unk 7:127236393-127236393 + Confirmed somatic variant NS NS Stage:I FSD1 ENST00000221856 13745 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178903 c.119C>T p.S40L Substitution - Missense unk 19:4306202-4306202 + Confirmed somatic variant NS NS Stage:I FTO ENST00000268349 24678 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191278 c.1010G>A p.R337H Substitution - Missense unk 16:53913790-53913790 + Confirmed somatic variant NS NS Stage:I FTSJD1 ENST00000338099 25635 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195033 c.1857T>C p.D619D Substitution - coding silent unk 16:71317967-71317967 - Confirmed somatic variant NS NS Stage:I FUSIP1 ENST00000374449 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183652 c.184C>T p.R62C Substitution - Missense unk 1:24301554-24301554 - Confirmed somatic variant NS NS Stage:I GAB4 ENST00000400588 18325 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181702 c.203G>A p.R68Q Substitution - Missense unk 22:17473038-17473038 - Confirmed somatic variant NS NS Stage:I GABBR1 ENST00000376998 4070 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184854 c.2768G>A p.R923H Substitution - Missense unk 6:29571438-29571438 - Confirmed somatic variant NS NS Stage:I GABPB2 ENST00000368918 28441 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205963 c.769G>A p.V257I Substitution - Missense unk 1:151079545-151079545 + Confirmed somatic variant NS NS Stage:I GABRA2 ENST00000356504 4076 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189455 c.1178C>T p.T393M Substitution - Missense unk 4:46252503-46252503 - Confirmed somatic variant NS NS Stage:I GABRQ NM_018558.1 14454 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206273 c.1067G>A p.R356Q Substitution - Missense unk 23:151820154-151820154 + Confirmed somatic variant NS NS Stage:I GABRQ NM_018558.1 14454 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206275 c.1526G>A p.R509H Substitution - Missense unk 23:151821371-151821371 + Confirmed somatic variant NS NS Stage:I GALE ENST00000374497 4116 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183605 c.252G>A p.A84A Substitution - coding silent unk 1:24124706-24124706 - Confirmed somatic variant NS NS Stage:I GALK1 ENST00000225614 4118 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195433 c.294G>A p.S98S Substitution - coding silent unk 17:73760039-73760039 - Confirmed somatic variant NS NS Stage:I GALK2 ENST00000396511 4119 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189925 c.710G>A p.R237Q Substitution - Missense unk 15:49575902-49575902 + Confirmed somatic variant NS NS Stage:I GALNTL1 ENST00000337827 23233 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194799 c.194C>T p.S65L Substitution - Missense unk 14:69787444-69787444 + Confirmed somatic variant NS NS Stage:I GCHFR ENST00000260447 4194 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187351 c.185G>A p.R62H Substitution - Missense unk 15:41059477-41059477 + Confirmed somatic variant NS NS Stage:I GCLC ENST00000229416 4311 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191488 c.755T>C p.V252A Substitution - Missense unk 6:53374047-53374047 - Confirmed somatic variant NS NS Stage:I GCNT2_ENST00000265012 ENST00000265012 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180703 c.340T>C p.F114L Substitution - Missense unk 6:10586562-10586562 + Confirmed somatic variant NS NS Stage:I GDF2 NM_016204.1 4217 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190107 c.290C>T p.T97M Substitution - Missense unk 10:48416404-48416404 - Confirmed somatic variant NS NS Stage:I GDPD5 ENST00000336898 28804 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196178 c.1138G>A p.V380M Substitution - Missense unk 11:75153437-75153437 - Confirmed somatic variant NS NS Stage:I GGA2 ENST00000309859 16064 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183409 c.833C>T p.T278M Substitution - Missense unk 16:23494291-23494291 - Confirmed somatic variant NS NS Stage:I GGA3 ENST00000245541 17079 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195313 c.1711G>T p.G571C Substitution - Missense unk 17:73235525-73235525 - Confirmed somatic variant NS NS Stage:I GIGYF2 ENST00000373563 11960 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210400 c.3355G>A p.E1119K Substitution - Missense unk 2:233710491-233710491 + Confirmed somatic variant NS NS Stage:I GIMAP8 ENST00000307271 21792 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206025 c.292C>T p.L98F Substitution - Missense unk 7:150164078-150164078 + Confirmed somatic variant NS NS Stage:I GLB1 NM_000404.1 4298 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185831 c.622C>T p.R208C Substitution - Missense unk 3:33099692-33099692 - Confirmed somatic variant NS NS Stage:I GLP1R NM_002062.2 4324 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187477 c.143G>A p.R48H Substitution - Missense unk 6:39024237-39024237 + Confirmed somatic variant NS NS Stage:I GLUD2 NM_012084.3 4336 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202418 c.1266T>C p.I422I Substitution - coding silent unk 23:120182804-120182804 + Confirmed somatic variant NS NS Stage:I GNA14 NM_004297.2 4382 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196890 c.529C>T p.R177C Substitution - Missense unk 9:80046301-80046301 - Confirmed somatic variant NS NS Stage:I GNB5 NM_016194.2 4401 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190789 c.1105C>T p.R369C Substitution - Missense unk 15:52416741-52416741 - Confirmed somatic variant NS NS Stage:I GOLGA1 ENST00000373555 4424 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203383 c.874G>A p.V292I Substitution - Missense unk 9:127674275-127674275 - Confirmed somatic variant NS NS Stage:I GOLGA4 ENST00000396405 4427 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186910 c.284G>A p.R95Q Substitution - Missense unk 3:37323570-37323570 + Confirmed somatic variant NS NS Stage:I GON4L ENST00000368330 25973 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206796 c.2866C>A p.L956I Substitution - Missense unk 1:155736398-155736398 - Confirmed somatic variant NS NS Stage:I GPAA1 ENST00000355091 4446 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205669 c.1099C>T p.R367C Substitution - Missense unk 8:145139713-145139713 + Confirmed somatic variant NS NS Stage:I GPC4 NM_001448.2 4452 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204197 c.970A>G p.M324V Substitution - Missense unk 23:132440090-132440090 - Confirmed somatic variant NS NS Stage:I GPC6 ENST00000377047 4454 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198528 c.1273G>A p.G425R Substitution - Missense unk 13:95034788-95034788 + Confirmed somatic variant NS NS Stage:I GPHN ENST00000305960 15465 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194518 c.1962C>G p.I654M Substitution - Missense unk 14:67631930-67631930 + Confirmed somatic variant NS NS Stage:I GPR113 ENST00000333478 18989 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184111 c.593C>T p.P198L Substitution - Missense unk 2:26536714-26536714 - Confirmed somatic variant NS NS Stage:I GPR12 ENST00000381436 4466 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184083 c.109G>C p.E37Q Substitution - Missense unk 13:27333856-27333856 - Confirmed somatic variant NS NS Stage:I GPR141 ENST00000334425 19997 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187008 c.698T>C p.V233A Substitution - Missense unk 7:37780693-37780693 + Confirmed somatic variant NS NS Stage:I GPR143 NM_000273.1 20145 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180409 c.369G>A p.S123S Substitution - coding silent unk 23:9728808-9728808 - Confirmed somatic variant NS NS Stage:I GPR173 NM_018969.3 18186 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191405 c.910G>A p.V304M Substitution - Missense unk 23:53106713-53106713 + Confirmed somatic variant NS NS Stage:I GPR173_ENST00000332582 ENST00000332582 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191406 c.910G>A p.V304M Substitution - Missense unk 23:53106713-53106713 + Confirmed somatic variant NS NS Stage:I GPR85 ENST00000297146 4536 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201358 c.989C>T p.A330V Substitution - Missense unk 7:112723788-112723788 - Confirmed somatic variant NS NS Stage:I GPR97 ENST00000333493 13728 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192387 c.1491G>A p.P497P Substitution - coding silent unk 16:57719789-57719789 + Confirmed somatic variant NS NS Stage:I GPR98 ENST00000405460 17416 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198116 c.3562A>G p.I1188V Substitution - Missense unk 5:89948308-89948308 + Confirmed somatic variant NS NS Stage:I GPRC5A ENST00000014914 9836 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181139 c.741C>T p.S247S Substitution - coding silent unk 12:13061924-13061924 + Confirmed somatic variant NS NS Stage:I GPRC5B ENST00000300571 13308 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182577 c.281G>A p.G94D Substitution - Missense unk 16:19883887-19883887 - Confirmed somatic variant NS NS Stage:I GRIA4 NM_000829.1 4574 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200394 c.1949G>A p.R650Q Substitution - Missense unk 11:105797568-105797568 + Confirmed somatic variant NS NS Stage:I GRIA4_ENST00000393127 ENST00000393127 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200395 c.1949G>A p.R650Q Substitution - Missense unk 11:105797568-105797568 + Confirmed somatic variant NS NS Stage:I GRIN2D ENST00000263269 4588 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191518 c.2232G>A p.A744A Substitution - coding silent unk 19:48925182-48925182 + Confirmed somatic variant NS NS Stage:I GRIPAP1_ENST00000376423 ENST00000376423 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190336 c.136G>A p.A46T Substitution - Missense unk 23:48855685-48855685 - Confirmed somatic variant NS NS Stage:I GRM3 ENST00000361669 4595 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197593 c.2029G>A p.A677T Substitution - Missense unk 7:86468859-86468859 + Confirmed somatic variant NS NS Stage:I GRN ENST00000053867 4601 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187684 c.630C>T p.D210D Substitution - coding silent unk 17:42428090-42428090 + Confirmed somatic variant NS NS Stage:I GSC2 ENST00000086933 4613 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182023 c.589G>A p.V197I Substitution - Missense unk 22:19136533-19136533 - Confirmed somatic variant NS NS Stage:I GSG1 ENST00000337630 19716 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181180 c.306G>A p.E102E Substitution - coding silent unk 12:13243456-13243456 - Confirmed somatic variant NS NS Stage:I GTF2B ENST00000370500 4648 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197961 c.547G>A p.V183I Substitution - Missense unk 1:89323159-89323159 - Confirmed somatic variant NS NS Stage:I GTF2F2 ENST00000358995 4653 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189049 c.63C>T p.V21V Substitution - coding silent unk 13:45694853-45694853 + Confirmed somatic variant NS NS Stage:I GTSE1 ENST00000160874 13698 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189189 c.1698G>A p.K566K Substitution - coding silent unk 22:46724615-46724615 + Confirmed somatic variant NS NS Stage:I GUCY2F NM_001522 4691 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200794 c.1882C>T p.R628* Substitution - Nonsense unk 23:108652307-108652307 - Confirmed somatic variant NS NS Stage:I GZMH ENST00000216338 4710 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183644 c.95G>A p.R32H Substitution - Missense unk 14:25077579-25077579 - Confirmed somatic variant NS NS Stage:I H6PD ENST00000377403 4795 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180313 c.784G>A p.D262N Substitution - Missense unk 1:9322156-9322156 + Confirmed somatic variant NS NS Stage:I HAX1 ENST00000328703 16915 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206483 c.786T>C p.D262D Substitution - coding silent unk 1:154248123-154248123 + Confirmed somatic variant NS NS Stage:I HEBP1 ENST00000014930 17176 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181159 c.454C>T p.R152C Substitution - Missense unk 12:13128358-13128358 - Confirmed somatic variant NS NS Stage:I HECA ENST00000367658 21041 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204960 c.1124G>A p.G375D Substitution - Missense unk 6:139488273-139488273 + Confirmed somatic variant NS NS Stage:I HECTD1 ENST00000399332 20157 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185089 c.3763G>A p.A1255T Substitution - Missense unk 14:31602603-31602603 - Confirmed somatic variant NS NS Stage:I HECTD3 NM_024602.4 26117 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189236 c.1539C>T p.R513R Substitution - coding silent unk 1:45469565-45469565 - Confirmed somatic variant NS NS Stage:I HECTD3_ENST00000372168 ENST00000372168 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189238 c.1221C>T p.R407R Substitution - coding silent unk 1:45469565-45469565 - Confirmed somatic variant NS NS Stage:I HECTD3_ENST00000372172 ENST00000372172 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189237 c.2391C>T p.R797R Substitution - coding silent unk 1:45469565-45469565 - Confirmed somatic variant NS NS Stage:I HECW1 NM_015052.2 22195 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188724 c.4329C>T p.Y1443Y Substitution - coding silent unk 7:43590187-43590187 + Confirmed somatic variant NS NS Stage:I HELQ ENST00000295488 18536 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197397 c.402T>C p.P134P Substitution - coding silent unk 4:84374994-84374994 - Confirmed somatic variant NS NS Stage:I HERC4 NM_022079.1 24521 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194892 c.2320A>G p.R774G Substitution - Missense unk 10:69714393-69714393 - Confirmed somatic variant NS NS Stage:I HIF3A NM_152794.1 15825 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191057 c.1154G>A p.R385Q Substitution - Missense unk 19:46825048-46825048 + Confirmed somatic variant NS NS Stage:I HIST1H4G ENST00000244537 4792 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184103 c.43G>A p.G15S Substitution - Missense unk 6:26247163-26247163 - Confirmed somatic variant NS NS Stage:I HIVEP2 ENST00000012134 4921 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205485 c.598A>G p.K200E Substitution - Missense unk 6:143095278-143095278 - Confirmed somatic variant NS NS Stage:I HIVEP3 ENST00000372583 13561 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188236 c.5245C>T p.R1749C Substitution - Missense unk 1:41990544-41990544 - Confirmed somatic variant NS NS Stage:I HK1 NM_033498.1 4922 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195339 c.366C>T p.I122I Substitution - coding silent unk 10:71119780-71119780 + Confirmed somatic variant NS NS Stage:I HLA-F ENST00000376861 4963 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184875 c.584A>G p.N195S Substitution - Missense unk 6:29692199-29692199 + Confirmed somatic variant NS NS Stage:I HMOX1 ENST00000216117 5013 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186080 c.291C>T p.Y97Y Substitution - coding silent unk 22:35782824-35782824 + Confirmed somatic variant NS NS Stage:I HNRNPA0 ENST00000314940 5030 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204709 c.825C>T p.G275G Substitution - coding silent unk 5:137088931-137088931 - Confirmed somatic variant NS NS Stage:I HOXA7 ENST00000396347 5108 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184301 c.479G>A p.R160H Substitution - Missense unk 7:27194742-27194742 - Confirmed somatic variant NS NS Stage:I HOXD10 ENST00000249501 5133 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208264 c.165G>A p.P55P Substitution - coding silent unk 2:176981726-176981726 + Confirmed somatic variant NS NS Stage:I HSD17B14 ENST00000263278 23238 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191635 c.300G>T p.E100D Substitution - Missense unk 19:49334994-49334994 - Confirmed somatic variant NS NS Stage:I HSDL1 ENST00000219439 16475 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197216 c.797C>T p.S266L Substitution - Missense unk 16:84163250-84163250 - Confirmed somatic variant NS NS Stage:I HSH2D ENST00000253680 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181753 c.599G>A p.R200H Substitution - Missense unk 19:16268144-16268144 + Confirmed somatic variant NS NS Stage:I HSPA4 NM_002154.3 5237 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204204 c.1254A>G p.E418E Substitution - coding silent unk 5:132425263-132425263 + Confirmed somatic variant NS NS Stage:I HSPA8 NM_006597.3 5241 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202734 c.182T>C p.M61T Substitution - Missense unk 11:122931851-122931851 - Confirmed somatic variant NS NS Stage:I HSPA9 NM_004134.4 5244 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204774 c.1288G>A p.G430S Substitution - Missense unk 5:137895675-137895675 - Confirmed somatic variant NS NS Stage:I HSPG2 ENST00000374695 5273 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183103 c.6583C>T p.R2195W Substitution - Missense unk 1:22179420-22179420 - Confirmed somatic variant NS NS Stage:I HSPG2 ENST00000374695 5273 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183112 c.2879G>A p.S960N Substitution - Missense unk 1:22202846-22202846 - Confirmed somatic variant NS NS Stage:I HTR5A ENST00000287907 5300 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 176732 c.454C>T p.R152C Substitution - Missense unk 7:154863063-154863063 + Confirmed somatic variant NS NS Stage:I HYDIN_ENST00000316490 ENST00000316490_v65 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194959 c.4584C>T p.L1528L Substitution - coding silent unk 16:71012868-71012868 - Confirmed somatic variant NS NS Stage:I HYDIN_ENST00000316490 ENST00000316490_v65 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194972 c.3565G>A p.V1189I Substitution - Missense unk 16:71052111-71052111 - Confirmed somatic variant NS NS Stage:I HYOU1 ENST00000353883 16931 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202203 c.2975G>A p.R992Q Substitution - Missense unk 11:118916330-118916330 - Confirmed somatic variant NS NS Stage:I IDH3G ENST00000217901 5386 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206555 c.623C>T p.A208V Substitution - Missense unk 23:153052970-153052970 - Confirmed somatic variant NS NS Stage:I IDS NM_000202.2 5389 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205855 c.514C>T p.R172* Substitution - Nonsense unk 23:148579832-148579832 - Confirmed somatic variant NS NS Stage:I IFNGR1 ENST00000367739 5439 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204743 c.1121T>G p.I374R Substitution - Missense unk 6:137519517-137519517 - Confirmed somatic variant NS NS Stage:I IGDCC4 ENST00000352385 13770 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193911 c.2434G>A p.G812S Substitution - Missense unk 15:65681724-65681724 - Confirmed somatic variant NS NS Stage:I IGFLR1 ENST00000246532 23620 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187986 c.157+1G>T p.? Unknown unk 19:36231924-36231924 - Confirmed somatic variant NS NS Stage:I IL18R1 ENST00000233957 5988 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200001 c.556G>A p.V186M Substitution - Missense unk 2:102992454-102992454 + Confirmed somatic variant NS NS Stage:I IL4R NM_000418.2 6015 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184332 c.1213C>T p.R405W Substitution - Missense unk 16:27373886-27373886 + Confirmed somatic variant NS NS Stage:I IMMP2L ENST00000331762 14598 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201003 c.500G>A p.R167H Substitution - Missense unk 7:110303686-110303686 - Confirmed somatic variant NS NS Stage:I IMMP2L ENST00000331762 14598 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201040 c.263A>C p.K88T Substitution - Missense unk 7:110603598-110603598 - Confirmed somatic variant NS NS Stage:I INPP5K ENST00000350761 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178160 c.787C>T p.R263C Substitution - Missense unk 17:1401406-1401406 - Confirmed somatic variant NS NS Stage:I INPP5K ENST00000350761 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178164 c.81G>A p.A27A Substitution - coding silent unk 17:1417237-1417237 - Confirmed somatic variant NS NS Stage:I INTS2 NM_020748.1 29241 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192703 c.1455G>A p.M485I Substitution - Missense unk 17:59974893-59974893 - Confirmed somatic variant NS NS Stage:I IPO11 NM_016338.3 20628 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193519 c.1803T>C p.C601C Substitution - coding silent unk 5:61811235-61811235 + Confirmed somatic variant NS NS Stage:I IPO4 NM_024658.2 19426 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183506 c.785C>T p.A262V Substitution - Missense unk 14:24655969-24655969 - Confirmed somatic variant NS NS Stage:I IQCF3_ENST00000456080 ENST00000456080_v65 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191126 c.148C>T p.R50C Substitution - Missense unk 3:51864500-51864500 + Confirmed somatic variant NS NS Stage:I IQSEC2 XM_291345.2 29059 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191451 c.2744T>C p.V915A Substitution - Missense unk 23:53272650-53272650 - Confirmed somatic variant NS NS Stage:I ITCH NM_031483.3 13890 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185655 c.170G>A p.C57Y Substitution - Missense unk 20:32996556-32996556 + Confirmed somatic variant NS NS Stage:I ITGA5 NM_002205.2 6141 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191401 c.217G>A p.G73R Substitution - Missense unk 12:54812766-54812766 - Confirmed somatic variant NS NS Stage:I ITGB2 NM_000211.1 6155 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189201 c.563G>A p.R188Q Substitution - Missense unk 21:46321585-46321585 - Confirmed somatic variant NS NS Stage:I ITIH2 ENST00000358415 6167 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179938 c.1689C>T p.D563D Substitution - coding silent unk 10:7774342-7774342 + Confirmed somatic variant NS NS Stage:I IWS1 ENST00000295321 25467 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203526 c.1671C>T p.D557D Substitution - coding silent unk 2:128253619-128253619 - Confirmed somatic variant NS NS Stage:I JAG1 NM_000214.1 6188 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180665 c.2289C>T p.G763G Substitution - coding silent unk 20:10625566-10625566 - Confirmed somatic variant NS NS Stage:I JAG1_ENST00000254958 ENST00000254958 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180666 c.2289C>T p.G763G Substitution - coding silent unk 20:10625566-10625566 - Confirmed somatic variant NS NS Stage:I JAK3 NM_000215 6193 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182100 c.2311C>T p.R771* Substitution - Nonsense unk 19:17945419-17945419 - Confirmed somatic variant NS NS Stage:I JAK3 NM_000215 6193 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182104 c.1739C>T p.S580L Substitution - Missense unk 19:17947985-17947985 - Confirmed somatic variant NS NS Stage:I JAKMIP1 NM_144720.2 26460 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179393 c.866G>A p.R289Q Substitution - Missense unk 4:6086661-6086661 - Confirmed somatic variant NS NS Stage:I JAKMIP1_ENST00000409021 ENST00000409021 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179394 c.866G>A p.R289Q Substitution - Missense unk 4:6086661-6086661 - Confirmed somatic variant NS NS Stage:I JMJD7 ENST00000397299 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187724 c.199T>C p.W67R Substitution - Missense unk 15:42127072-42127072 + Confirmed somatic variant NS NS Stage:I JMJD7-PLA2G4B ENST00000382448 34449 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187723 c.199T>C p.W67R Substitution - Missense unk 15:42127072-42127072 + Confirmed somatic variant NS NS Stage:I JMJD7-PLA2G4B_ENST00000542534 ENST00000542534 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187725 c.199T>C p.W67R Substitution - Missense unk 15:42127072-42127072 + Confirmed somatic variant NS NS Stage:I KCNA10 ENST00000369771 6219 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201132 c.259C>T p.R87W Substitution - Missense unk 1:111061151-111061151 - Confirmed somatic variant NS NS Stage:I KCNA2 ENST00000316361 6220 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201145 c.1184C>T p.A395V Substitution - Missense unk 1:111146221-111146221 - Confirmed somatic variant NS NS Stage:I KCNC1 ENST00000265969 6233 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182087 c.699G>A p.V233V Substitution - coding silent unk 11:17793340-17793340 + Confirmed somatic variant NS NS Stage:I KCNC2 ENST00000298972 6234 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195937 c.1684C>T p.R562C Substitution - Missense unk 12:75442029-75442029 - Confirmed somatic variant NS NS Stage:I KCNC2_ENST00000549446 ENST00000549446 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195938 c.1684C>T p.R562C Substitution - Missense unk 12:75442029-75442029 - Confirmed somatic variant NS NS Stage:I KCND3 ENST00000369697 6239 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201329 c.1076G>A p.W359* Substitution - Nonsense unk 1:112524273-112524273 - Confirmed somatic variant NS NS Stage:I KCNK13 ENST00000282146 6275 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198083 c.589G>A p.V197I Substitution - Missense unk 14:90650709-90650709 + Confirmed somatic variant NS NS Stage:I KCNN2 ENST00000264773 6291 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201554 c.567C>T p.H189H Substitution - coding silent unk 5:113699683-113699683 + Confirmed somatic variant NS NS Stage:I KCNN2_ENST00000512097 ENST00000512097 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201555 c.567C>T p.H189H Substitution - coding silent unk 5:113699683-113699683 + Confirmed somatic variant NS NS Stage:I KCNQ2 ENST00000359125 6296 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193440 c.1267G>T p.G423W Substitution - Missense unk 20:62051006-62051006 - Confirmed somatic variant NS NS Stage:I KCNU1_ENST00000399881 ENST00000399881_v65 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186730 c.222T>C p.A74A Substitution - coding silent unk 8:36644850-36644850 + Confirmed somatic variant NS NS Stage:I KDM2B_ENST00000377071 ENST00000377071 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202480 c.671C>T p.P224L Substitution - Missense unk 12:121986794-121986794 - Confirmed somatic variant NS NS Stage:I KDM4A NM_014663.1 22978 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188855 c.2733C>T p.N911N Substitution - coding silent unk 1:44163576-44163576 + Confirmed somatic variant NS NS Stage:I KDM5B_ENST00000367265 ENST00000367265 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209497 c.3758G>A p.R1253Q Substitution - Missense unk 1:202702680-202702680 - Confirmed somatic variant NS NS Stage:I KHNYN ENST00000251343 20166 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183594 c.457G>A p.G153R Substitution - Missense unk 14:24900924-24900924 + Confirmed somatic variant NS NS Stage:I KIAA0319L ENST00000335883 30071 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186418 c.2171T>C p.V724A Substitution - Missense unk 1:35916002-35916002 - Confirmed somatic variant NS NS Stage:I KIAA0319L_ENST00000325722 ENST00000325722 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186419 c.2171T>C p.V724A Substitution - Missense unk 1:35916002-35916002 - Confirmed somatic variant NS NS Stage:I KIAA0467_ENST00000372442 ENST00000372442 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188779 c.3504G>A p.L1168L Substitution - coding silent unk 1:43903090-43903090 + Confirmed somatic variant NS NS Stage:I KIAA1210 XM_172801.3 29218 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202153 c.1254G>T p.M418I Substitution - Missense unk 23:118223411-118223411 - Confirmed somatic variant NS NS Stage:I KIAA1324 ENST00000234923 29618 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200905 c.2898C>T p.G966G Substitution - coding silent unk 1:109743447-109743447 + Confirmed somatic variant NS NS Stage:I KIAA1404 ENST00000396105 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189893 c.5711C>T p.T1904M Substitution - Missense unk 20:47863850-47863850 - Confirmed somatic variant NS NS Stage:I KIAA2022 NM_001008537.1 29433 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195960 c.3106A>G p.I1036V Substitution - Missense unk 23:73961286-73961286 - Confirmed somatic variant NS NS Stage:I KIF1B ENST00000263934 16636 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180580 c.2854G>C p.E952Q Substitution - Missense unk 1:10394645-10394645 + Confirmed somatic variant NS NS Stage:I KIF1B ENST00000263934 16636 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180597 c.5136G>A p.Q1712Q Substitution - coding silent unk 1:10435089-10435089 + Confirmed somatic variant NS NS Stage:I KIR2DL1 ENST00000336077 6329 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193114 c.414G>A p.T138T Substitution - coding silent unk 19:55286660-55286660 + Confirmed somatic variant NS NS Stage:I KLF11 NM_003597.4 11811 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180507 c.1394G>A p.R465H Substitution - Missense unk 2:10192489-10192489 + Confirmed somatic variant NS NS Stage:I KLHL14 ENST00000359358 29266 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184644 c.1007G>A p.R336Q Substitution - Missense unk 18:30321953-30321953 - Confirmed somatic variant NS NS Stage:I KLRK1 ENST00000240618 18788 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180610 c.578C>T p.A193V Substitution - Missense unk 12:10525786-10525786 - Confirmed somatic variant NS NS Stage:I KMO ENST00000366559 6381 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210581 c.478T>C p.C160R Substitution - Missense unk 1:241725495-241725495 + Confirmed somatic variant NS NS Stage:I KNTC1 NM_014708.3 17255 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202647 c.606T>C p.H202H Substitution - coding silent unk 12:123028753-123028753 + Confirmed somatic variant NS NS Stage:I KRR1 ENST00000229214 5176 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196013 c.105G>A p.T35T Substitution - coding silent unk 12:75902207-75902207 - Confirmed somatic variant NS NS Stage:I KRT13 ENST00000246635 6415 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186778 c.816C>T p.R272R Substitution - coding silent unk 17:39659270-39659270 - Confirmed somatic variant NS NS Stage:I KRT24 ENST00000264651 18527 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186537 c.784C>T p.R262C Substitution - Missense unk 17:38857463-38857463 - Confirmed somatic variant NS NS Stage:I KRT4 ENST00000293774 6441 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191046 c.1023C>T p.D341D Substitution - coding silent unk 12:53203200-53203200 - Confirmed somatic variant NS NS Stage:I KRT6C ENST00000252250 20406 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191003 c.676G>A p.D226N Substitution - Missense unk 12:52865929-52865929 - Confirmed somatic variant NS NS Stage:I KRT75 ENST00000252245 24431 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190994 c.411A>G p.Q137Q Substitution - coding silent unk 12:52827678-52827678 - Confirmed somatic variant NS NS Stage:I KRT83 ENST00000293670 6460 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190963 c.744C>T p.Y248Y Substitution - coding silent unk 12:52711471-52711471 - Confirmed somatic variant NS NS Stage:I KRT85 ENST00000257901 6462 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190969 c.796G>A p.V266I Substitution - Missense unk 12:52757185-52757185 - Confirmed somatic variant NS NS Stage:I KRTAP9-4 ENST00000334109 18902 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186701 c.189G>A p.Q63Q Substitution - coding silent unk 17:39406161-39406161 + Confirmed somatic variant NS NS Stage:I KSR1 SU_KSR1 6465 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183295 c.565C>T p.R189W Substitution - Missense unk 17:25909716-25909716 + Confirmed somatic variant NS NS Stage:I KSR1_ENST00000319524 ENST00000319524 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183296 c.565C>T p.R189W Substitution - Missense unk 17:25909716-25909716 + Confirmed somatic variant NS NS Stage:I KSR2 SU_KSR2 18610 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201925 c.2142C>T p.H714H Substitution - coding silent unk 12:117962830-117962830 - Confirmed somatic variant NS NS Stage:I LAMB4 ENST00000205386 6491 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200634 c.4186G>T p.G1396C Substitution - Missense unk 7:107688493-107688493 - Confirmed somatic variant NS NS Stage:I LAMP1 ENST00000332556 6499 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201438 c.1046C>T p.A349V Substitution - Missense unk 13:113975974-113975974 + Confirmed somatic variant NS NS Stage:I LARGE ENST00000397394 6511 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185527 c.1627G>A p.V543M Substitution - Missense unk 22:33700318-33700318 - Confirmed somatic variant NS NS Stage:I LARGE ENST00000397394 6511 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185630 c.186C>T p.R62R Substitution - coding silent unk 22:34046575-34046575 - Confirmed somatic variant NS NS Stage:I LARP4B ENST00000316157 28987 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178076 c.1936C>T p.R646* Substitution - Nonsense unk 10:859147-859147 - Confirmed somatic variant NS NS Stage:I LATS1_ENST00000543571 ENST00000543571 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206056 c.2130A>G p.T710T Substitution - coding silent unk 6:150001474-150001474 - Confirmed somatic variant NS NS Stage:I LENG8 ENST00000326764 15500 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193064 c.1289G>A p.R430H Substitution - Missense unk 19:54967409-54967409 + Confirmed somatic variant NS NS Stage:I LEPREL2_ENST00000396725 ENST00000396725_v65 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179591 c.1976C>T p.A659V Substitution - Missense unk 12:6948237-6948237 + Confirmed somatic variant NS NS Stage:I LIG1 NM_000234.1 6598 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191459 c.1731C>T p.H577H Substitution - coding silent unk 19:48634423-48634423 - Confirmed somatic variant NS NS Stage:I LIMK1 NM_002314.2 6613 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195820 c.436G>A p.V146I Substitution - Missense unk 7:73513396-73513396 + Confirmed somatic variant NS NS Stage:I LIPE ENST00000244289 6621 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189992 c.1338C>T p.D446D Substitution - coding silent unk 19:42914540-42914540 - Confirmed somatic variant NS NS Stage:I LLPH ENST00000266604 28229 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194195 c.261A>G p.L87L Substitution - coding silent unk 12:66517749-66517749 - Confirmed somatic variant NS NS Stage:I LMBRD2 ENST00000296603 25287 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186542 c.2054C>T p.S685L Substitution - Missense unk 5:36104182-36104182 - Confirmed somatic variant NS NS Stage:I LOC652153 ENST00000316490 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194958 c.4440C>T p.L1480L Substitution - coding silent unk 16:71012868-71012868 - Confirmed somatic variant NS NS Stage:I LOC652153 ENST00000316490 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194971 c.3421G>A p.V1141I Substitution - Missense unk 16:71052111-71052111 - Confirmed somatic variant NS NS Stage:I LONP1 ENST00000360614 9479 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179248 c.2756A>T p.D919V Substitution - Missense unk 19:5692167-5692167 - Confirmed somatic variant NS NS Stage:I LOXL3 NM_032603.2 13869 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196138 c.753G>A p.T251T Substitution - coding silent unk 2:74763995-74763995 - Confirmed somatic variant NS NS Stage:I LPPR4 ENST00000370185 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199360 c.220G>A p.E74K Substitution - Missense unk 1:99730225-99730225 + Confirmed somatic variant NS NS Stage:I LRFN3 ENST00000246529 28370 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188036 c.1257G>T p.K419N Substitution - Missense unk 19:36431584-36431584 + Confirmed somatic variant NS NS Stage:I LRIT2 ENST00000372113 23443 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197551 c.55G>A p.A19T Substitution - Missense unk 10:85985222-85985222 - Confirmed somatic variant NS NS Stage:I LRMP NM_006152.2 6690 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183897 c.110C>T p.S37L Substitution - Missense unk 12:25232370-25232370 + Confirmed somatic variant NS NS Stage:I LRP1 ENST00000243077 6692 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192257 c.5511C>T p.D1837D Substitution - coding silent unk 12:57574574-57574574 + Confirmed somatic variant NS NS Stage:I LRP2 ENST00000263816 6694 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207941 c.3909G>T p.K1303N Substitution - Missense unk 2:170097634-170097634 - Confirmed somatic variant NS NS Stage:I LRP5 NM_002335.1 6697 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194652 c.2115C>T p.N705N Substitution - coding silent unk 11:68177405-68177405 + Confirmed somatic variant NS NS Stage:I LRRC23 ENST00000007969 19138 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179621 c.852C>T p.D284D Substitution - coding silent unk 12:7021987-7021987 + Confirmed somatic variant NS NS Stage:I LRRC4C ENST00000278198 29317 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187761 c.1409G>A p.R470Q Substitution - Missense unk 11:40136434-40136434 - Confirmed somatic variant NS NS Stage:I LRRN4 ENST00000378858 16208 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179336 c.1467G>A p.S489S Substitution - coding silent unk 20:6022424-6022424 - Confirmed somatic variant NS NS Stage:I LSG1 ENST00000265245 25652 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209342 c.521G>T p.S174I Substitution - Missense unk 3:194386286-194386286 - Confirmed somatic variant NS NS Stage:I LUC7L ENST00000397783 6723 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 177918 c.351G>A p.A117A Substitution - coding silent unk 16:258092-258092 - Confirmed somatic variant NS NS Stage:I LYST ENST00000389793 1968 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210412 c.4844T>C p.I1615T Substitution - Missense unk 1:235950518-235950518 - Confirmed somatic variant NS NS Stage:I MADD NM_003682.2 6766 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189880 c.3249G>T p.M1083I Substitution - Missense unk 11:47312255-47312255 + Confirmed somatic variant NS NS Stage:I MALT1 ENST00000345724 6819 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191798 c.1442C>T p.T481M Substitution - Missense unk 18:56401613-56401613 + Confirmed somatic variant NS NS Stage:I MALT1 ENST00000345724 6819 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191800 c.2101A>G p.I701V Substitution - Missense unk 18:56414733-56414733 + Confirmed somatic variant NS NS Stage:I MAN2C1 ENST00000267978 6827 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195874 c.68C>T p.P23L Substitution - Missense unk 15:75660857-75660857 - Confirmed somatic variant NS NS Stage:I MAP1LC3A ENST00000397711 6838 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185720 c.300G>A p.A100A Substitution - coding silent unk 20:33147624-33147624 + Confirmed somatic variant NS NS Stage:I MAP1S ENST00000324096 15715 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182080 c.3013C>T p.R1005C Substitution - Missense unk 19:17844226-17844226 + Confirmed somatic variant NS NS Stage:I MAP3K1 XM_042066 6848 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192361 c.2835T>C p.S945S Substitution - coding silent unk 5:56178351-56178351 + Confirmed somatic variant NS NS Stage:I MAP3K12 NM_006301 6851 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191210 c.2541C>T p.S847S Substitution - coding silent unk 12:53875005-53875005 - Confirmed somatic variant NS NS Stage:I MAP3K6_ENST00000374040 ENST00000374040 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184447 c.2755G>A p.A919T Substitution - Missense unk 1:27684808-27684808 - Confirmed somatic variant NS NS Stage:I MAPK4_ENST00000400384 ENST00000400384 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189595 c.1192C>T p.R398C Substitution - Missense unk 18:48255652-48255652 + Confirmed somatic variant NS NS Stage:I MAPK8 NM_002750 6881 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190546 c.691A>G p.I231V Substitution - Missense unk 10:49633933-49633933 + Confirmed somatic variant NS NS Stage:I MAPK8IP1 ENST00000241014 6882 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189431 c.1992C>T p.P664P Substitution - coding silent unk 11:45926729-45926729 + Confirmed somatic variant NS NS Stage:I MAPKAPK2 NM_032960 6887 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209670 c.360C>T p.I120I Substitution - coding silent unk 1:206902135-206902135 + Confirmed somatic variant NS NS Stage:I MARCH7 ENST00000259050 17393 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207392 c.229C>T p.R77C Substitution - Missense unk 2:160599647-160599647 + Confirmed somatic variant NS NS Stage:I MARK2 NM_017490 3332 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193907 c.1091G>A p.R364Q Substitution - Missense unk 11:63669758-63669758 + Confirmed somatic variant NS NS Stage:I MARK3 NM_002376 6897 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200115 c.2011G>A p.V671M Substitution - Missense unk 14:103969433-103969433 + Confirmed somatic variant NS NS Stage:I MASP2 ENST00000234505 6902 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180762 c.1451C>T p.A484V Substitution - Missense unk 1:11087552-11087552 - Confirmed somatic variant NS NS Stage:I MAST4_ENST00000404260 ENST00000404260 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194472 c.1052C>T p.P351L Substitution - Missense unk 5:66396393-66396393 + Confirmed somatic variant NS NS Stage:I MBD2 BC032638.1 6917 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190721 c.676C>T p.R226* Substitution - Nonsense unk 18:51731394-51731394 - Confirmed somatic variant NS NS Stage:I MBD6 ENST00000355673 20445 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192359 c.1647G>A p.Q549Q Substitution - coding silent unk 12:57920575-57920575 + Confirmed somatic variant NS NS Stage:I MCART1 ENST00000377716 23323 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187056 c.544C>T p.R182W Substitution - Missense unk 9:37888004-37888004 - Confirmed somatic variant NS NS Stage:I MCCC1 ENST00000265594 6936 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208926 c.1780G>T p.D594Y Substitution - Missense unk 3:182740294-182740294 - Confirmed somatic variant NS NS Stage:I MCF2L2 NM_015078.2 30319 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208950 c.2958T>C p.N986N Substitution - coding silent unk 3:182910845-182910845 - Confirmed somatic variant NS NS Stage:I MCHR1 ENST00000249016 4479 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187550 c.514C>T p.L172F Substitution - Missense unk 22:41077177-41077177 + Confirmed somatic variant NS NS Stage:I MCHR1 ENST00000249016 4479 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187553 c.1157C>T p.T386M Substitution - Missense unk 22:41077820-41077820 + Confirmed somatic variant NS NS Stage:I MDN1 ENST00000369393 18302 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198159 c.12425G>A p.R4142H Substitution - Missense unk 6:90387403-90387403 - Confirmed somatic variant NS NS Stage:I MDN1 ENST00000369393 18302 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198177 c.2893C>T p.R965W Substitution - Missense unk 6:90463873-90463873 - Confirmed somatic variant NS NS Stage:I MECOM ENST00000264674 3498 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207998 c.1839delA p.G614fs*30 Deletion - Frameshift unk 3:168833257-168833257 - Confirmed somatic variant NS NS Stage:I MED12L ENST00000273432 16050 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206422 c.27T>C p.Y9Y Substitution - coding silent unk 3:150804740-150804740 + Confirmed somatic variant NS NS Stage:I MED13 ENST00000397786 22474 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192723 c.103T>C p.W35R Substitution - Missense unk 17:60140626-60140626 - Confirmed somatic variant NS NS Stage:I MED8 ENST00000362029 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188745 c.345G>T p.Q115H Substitution - Missense unk 1:43851779-43851779 - Confirmed somatic variant NS NS Stage:I MEGF10 ENST00000274473 29634 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203401 c.2812A>C p.T938P Substitution - Missense unk 5:126783332-126783332 + Confirmed somatic variant NS NS Stage:I METTL13 ENST00000361735 24248 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207975 c.1967C>T p.P656L Substitution - Missense unk 1:171765763-171765763 + Confirmed somatic variant NS NS Stage:I MGAT1 ENST00000333055 7044 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208790 c.920A>C p.E307A Substitution - Missense unk 5:180219052-180219052 - Confirmed somatic variant NS NS Stage:I MGC42105 NM_153361 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188642 c.488G>T p.S163I Substitution - Missense unk 5:43277354-43277354 + Confirmed somatic variant NS NS Stage:I MIOX ENST00000216075 14522 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190532 c.40C>T p.R14* Substitution - Nonsense unk 22:50925838-50925838 + Confirmed somatic variant NS NS Stage:I MKX ENST00000375790 23729 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184556 c.304G>A p.E102K Substitution - Missense unk 10:28030318-28030318 - Confirmed somatic variant NS NS Stage:I MLL5 ENST00000257745 18541 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200287 c.133T>C p.L45L Substitution - coding silent unk 7:104702672-104702672 + Confirmed somatic variant NS NS Stage:I MMD2 ENST00000401401 30133 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179079 c.323G>A p.R108Q Substitution - Missense unk 7:4955678-4955678 - Confirmed somatic variant NS NS Stage:I MMD2_ENST00000404774 ENST00000404774 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179080 c.323G>A p.R108Q Substitution - Missense unk 7:4955678-4955678 - Confirmed somatic variant NS NS Stage:I MMS19 ENST00000438925 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199294 c.1087C>G p.P363A Substitution - Missense unk 10:99228140-99228140 - Confirmed somatic variant NS NS Stage:I MOGAT1_ENST00000446656 ENST00000446656 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210151 c.272A>G p.H91R Substitution - Missense unk 2:223553240-223553240 + Confirmed somatic variant NS NS Stage:I MPO ENST00000225275 7218 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191542 c.1501G>A p.G501S Substitution - Missense unk 17:56350895-56350895 - Confirmed somatic variant NS NS Stage:I MRI1_ENST00000319545 ENST00000319545 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181280 c.415C>T p.Q139* Substitution - Nonsense unk 19:13879216-13879216 + Confirmed somatic variant NS NS Stage:I MRPS11 ENST00000325844 14050 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197647 c.353G>A p.R118Q Substitution - Missense unk 15:89018412-89018412 + Confirmed somatic variant NS NS Stage:I MRPS23 ENST00000313608 14509 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191448 c.228A>G p.S76S Substitution - coding silent unk 17:55918609-55918609 - Confirmed somatic variant NS NS Stage:I MS4A10 ENST00000308287 13368 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193191 c.421G>A p.V141I Substitution - Missense unk 11:60561505-60561505 + Confirmed somatic variant NS NS Stage:I MTOR NM_004958 3942 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180820 c.158G>A p.R53Q Substitution - Missense unk 1:11319309-11319309 - Confirmed somatic variant NS NS Stage:I MUC16 ENST00000397910 15582 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180247 c.1911C>T p.S637S Substitution - coding silent unk 19:9089904-9089904 - Confirmed somatic variant NS NS Stage:I MUC16_ENST00000397910 ENST00000397910_v65 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180248 c.1911C>T p.S637S Substitution - coding silent unk 19:9089904-9089904 - Confirmed somatic variant NS NS Stage:I MUC4_ENST00000405167 ENST00000405167 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209377 c.2704G>A p.A902T Substitution - Missense unk 3:195515747-195515747 - Confirmed somatic variant NS NS Stage:I MUC4_ENST00000463781 ENST00000463781 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209378 c.2704G>A p.A902T Substitution - Missense unk 3:195515747-195515747 - Confirmed somatic variant NS NS Stage:I MUM1 ENST00000344663 29641 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178143 c.266G>C p.R89T Substitution - Missense unk 19:1360183-1360183 + Confirmed somatic variant NS NS Stage:I MUS81 NM_025128.3 29814 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194286 c.1282C>A p.L428I Substitution - Missense unk 11:65632497-65632497 + Confirmed somatic variant NS NS Stage:I MUSK NM_005592 7525 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201367 c.1062G>A p.T354T Substitution - coding silent unk 9:113530241-113530241 + Confirmed somatic variant NS NS Stage:I MYH14 ENST00000301415 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192103 c.3164C>T p.T1055I Substitution - Missense unk 19:50775222-50775222 + Confirmed somatic variant NS NS Stage:I MYH14_ENST00000262269 ENST00000262269 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192104 c.3288C>T p.D1096D Substitution - coding silent unk 19:50775222-50775222 + Confirmed somatic variant NS NS Stage:I MYH4 ENST00000255381 7574 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180567 c.5751T>G p.A1917A Substitution - coding silent unk 17:10346761-10346761 - Confirmed somatic variant NS NS Stage:I MYH9 ENST00000216181 7579 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186232 c.4306G>A p.A1436T Substitution - Missense unk 22:36688070-36688070 - Confirmed somatic variant NS NS Stage:I MYO10 ENST00000274203 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181873 c.3519C>T p.V1173V Substitution - coding silent unk 5:16699596-16699596 - Confirmed somatic variant NS NS Stage:I MYO15A ENST00000205890 7594 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182141 c.6G>A p.A2A Substitution - coding silent unk 17:18022120-18022120 + Confirmed somatic variant NS NS Stage:I MYO6 ENST00000369977 7605 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196474 c.243T>C p.Y81Y Substitution - coding silent unk 6:76538312-76538312 + Confirmed somatic variant NS NS Stage:I MYO9A ENST00000356056 7608 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195049 c.6385G>A p.V2129I Substitution - Missense unk 15:72144563-72144563 - Confirmed somatic variant NS NS Stage:I MYOC NM_000261.1 7610 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207964 c.913A>G p.S305G Substitution - Missense unk 1:171605667-171605667 - Confirmed somatic variant NS NS Stage:I MYOM2 ENST00000262113 7614 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178308 c.2430G>A p.M810I Substitution - Missense unk 8:2046803-2046803 + Confirmed somatic variant NS NS Stage:I NAV3 NM_014903.3 15998 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196582 c.6878G>A p.R2293Q Substitution - Missense unk 12:78598824-78598824 + Confirmed somatic variant NS NS Stage:I NBEAL2 ENST00000292309 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189781 c.5312G>A p.R1771Q Substitution - Missense unk 3:47048602-47048602 + Confirmed somatic variant NS NS Stage:I NBEAL2_ENST00000450053 ENST00000450053 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189782 c.7181G>A p.R2394Q Substitution - Missense unk 3:47048602-47048602 + Confirmed somatic variant NS NS Stage:I NCAM1_ENST00000316851 ENST00000316851_v65 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201370 c.1784C>T p.T595M Substitution - Missense unk 11:113105875-113105875 + Confirmed somatic variant NS NS Stage:I NCEH1 ENST00000273512 29260 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208154 c.1063C>T p.R355C Substitution - Missense unk 3:172351525-172351525 - Confirmed somatic variant NS NS Stage:I NCOA5 NM_020967.1 15909 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188920 c.607A>G p.I203V Substitution - Missense unk 20:44695716-44695716 - Confirmed somatic variant NS NS Stage:I NDUFAB1 ENST00000007516 7694 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183432 c.255C>T p.Y85Y Substitution - coding silent unk 16:23598554-23598554 - Confirmed somatic variant NS NS Stage:I NDUFS1 ENST00000233190 7707 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209714 c.808G>A p.V270M Substitution - Missense unk 2:207009680-207009680 - Confirmed somatic variant NS NS Stage:I NEB ENST00000172853 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206383 c.16812C>T p.L5604L Substitution - coding silent unk 2:152383462-152383462 - Confirmed somatic variant NS NS Stage:I NEBL ENST00000377122 16932 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182968 c.1434A>T p.A478A Substitution - coding silent unk 10:21124457-21124457 - Confirmed somatic variant NS NS Stage:I NEDD9 U64317.1 7733 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180825 c.946G>A p.A316T Substitution - Missense unk 6:11191156-11191156 - Confirmed somatic variant NS NS Stage:I NEDD9_ENST00000379446 ENST00000379446 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180826 c.946G>A p.A316T Substitution - Missense unk 6:11191156-11191156 - Confirmed somatic variant NS NS Stage:I NEK1 SU_NEK1 7744 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208012 c.3141G>A p.S1047S Substitution - coding silent unk 4:170345785-170345785 - Confirmed somatic variant NS NS Stage:I NEK5_ENST00000355568 ENST00000355568 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191064 c.2099C>T p.P700L Substitution - Missense unk 13:52639571-52639571 - Confirmed somatic variant NS NS Stage:I NFATC4 ENST00000250373 7778 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183575 c.622C>T p.R208C Substitution - Missense unk 14:24839226-24839226 + Confirmed somatic variant NS NS Stage:I NFIC NM_205843.1 7786 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178687 c.136C>T p.R46C Substitution - Missense unk 19:3381842-3381842 + Confirmed somatic variant NS NS Stage:I NIPAL3 ENST00000374399 25233 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183770 c.1038C>T p.H346H Substitution - coding silent unk 1:24795492-24795492 + Confirmed somatic variant NS NS Stage:I NIPBL NM_133433.2 28862 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186849 c.7936C>T p.R2646W Substitution - Missense unk 5:37063967-37063967 + Confirmed somatic variant NS NS Stage:I NIPBL_ENST00000448238 ENST00000448238 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186850 c.7936C>T p.R2646W Substitution - Missense unk 5:37063967-37063967 + Confirmed somatic variant NS NS Stage:I NLRP13 ENST00000342929 22937 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193346 c.1787T>C p.I596T Substitution - Missense unk 19:56423396-56423396 - Confirmed somatic variant NS NS Stage:I NLRP2 ENST00000263437 22948 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193162 c.1602C>T p.D534D Substitution - coding silent unk 19:55494668-55494668 + Confirmed somatic variant NS NS Stage:I NLRP2_ENST00000543010 ENST00000543010 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193163 c.1602C>T p.D534D Substitution - coding silent unk 19:55494668-55494668 + Confirmed somatic variant NS NS Stage:I NLRP8 ENST00000291971 22940 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193366 c.1805C>T p.P602L Substitution - Missense unk 19:56467229-56467229 + Confirmed somatic variant NS NS Stage:I NLRP8_ENST00000291971 ENST00000291971_v65 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193367 c.1805C>T p.P602L Substitution - Missense unk 19:56467229-56467229 + Confirmed somatic variant NS NS Stage:I NOS3 ENST00000297494 7876 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206093 c.3306C>T p.R1102R Substitution - coding silent unk 7:150710862-150710862 + Confirmed somatic variant NS NS Stage:I NOTCH2 NM_024408.2 7882 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202457 c.1911G>A p.T637T Substitution - coding silent unk 1:120506201-120506201 - Confirmed somatic variant NS NS Stage:I NOVA1 NM_002515.2 7886 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184032 c.806G>T p.G269V Substitution - Missense unk 14:26917883-26917883 - Confirmed somatic variant NS NS Stage:I NPC1L1 ENST00000289547 7898 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189029 c.885C>T p.F295F Substitution - coding silent unk 7:44579111-44579111 - Confirmed somatic variant NS NS Stage:I NPPB ENST00000376468 7940 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180931 c.252C>T p.T84T Substitution - coding silent unk 1:11918407-11918407 - Confirmed somatic variant NS NS Stage:I NPR2 NM_003995 7944 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186449 c.2233C>T p.R745W Substitution - Missense unk 9:35806091-35806091 + Confirmed somatic variant NS NS Stage:I NR1H3 NM_005693.1 7966 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189867 c.1257C>T p.S419S Substitution - coding silent unk 11:47290160-47290160 + Confirmed somatic variant NS NS Stage:I NRSN1 ENST00000378491 17881 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183658 c.133G>T p.E45* Substitution - Nonsense unk 6:24134688-24134688 + Confirmed somatic variant NS NS Stage:I NRXN1 ENST00000342183 8008 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190728 c.1098G>A p.T366T Substitution - coding silent unk 2:50149313-50149313 - Confirmed somatic variant NS NS Stage:I NSD1 NM_022455.3 14234 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208251 c.2822G>A p.R941H Substitution - Missense unk 5:176638222-176638222 + Confirmed somatic variant NS NS Stage:I NSD1_ENST00000439151 ENST00000439151 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208252 c.2822G>A p.R941H Substitution - Missense unk 5:176638222-176638222 + Confirmed somatic variant NS NS Stage:I NSDHL NM_015922.1 13398 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206314 c.889T>G p.Y297D Substitution - Missense unk 23:152037427-152037427 + Confirmed somatic variant NS NS Stage:I NTRK3 NM_002530 8033 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197604 c.458G>A p.R153Q Substitution - Missense unk 15:88690572-88690572 - Confirmed somatic variant NS NS Stage:I NTRK3_ENST00000317501 ENST00000317501 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197606 c.458G>A p.R153Q Substitution - Missense unk 15:88690572-88690572 - Confirmed somatic variant NS NS Stage:I NTRK3_ENST00000360948 ENST00000360948 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197605 c.458G>A p.R153Q Substitution - Missense unk 15:88690572-88690572 - Confirmed somatic variant NS NS Stage:I NUP88 NM_002532.3 8067 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179146 c.1936A>C p.S646R Substitution - Missense unk 17:5290411-5290411 - Confirmed somatic variant NS NS Stage:I NWD1 ENST00000339803 27619 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181864 c.453G>A p.T151T Substitution - coding silent unk 19:16860311-16860311 + Confirmed somatic variant NS NS Stage:I NXF1 NM_006362.3 8071 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193636 c.733G>A p.V245I Substitution - Missense unk 11:62568866-62568866 - Confirmed somatic variant NS NS Stage:I OAS3 ENST00000228928 8088 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201249 c.542C>T p.A181V Substitution - Missense unk 12:113382362-113382362 + Confirmed somatic variant NS NS Stage:I ODZ2 ENST00000388903 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207738 c.4328C>T p.T1443I Substitution - Missense unk 5:167645725-167645725 + Confirmed somatic variant NS NS Stage:I ODZ2 ENST00000388903 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207739 c.4673G>A p.R1558Q Substitution - Missense unk 5:167653158-167653158 + Confirmed somatic variant NS NS Stage:I OLA1 ENST00000284719 28833 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208178 c.1051G>A p.E351K Substitution - Missense unk 2:174943734-174943734 - Confirmed somatic variant NS NS Stage:I ONECUT1 ENST00000305901 8138 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190946 c.243C>T p.G81G Substitution - coding silent unk 15:53081839-53081839 - Confirmed somatic variant NS NS Stage:I OPN3 ENST00000366554 14007 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210584 c.426C>T p.R142R Substitution - coding silent unk 1:241767829-241767829 - Confirmed somatic variant NS NS Stage:I OR10H1 ENST00000334920 8172 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181687 c.373G>A p.A125T Substitution - Missense unk 19:15918475-15918475 - Confirmed somatic variant NS NS Stage:I OR10J1 ENST00000302444 8175 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207155 c.872T>C p.I291T Substitution - Missense unk 1:159410420-159410420 + Confirmed somatic variant NS NS Stage:I OR1L3 ENST00000304820 8215 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203101 c.609G>A p.G203G Substitution - coding silent unk 9:125438017-125438017 + Confirmed somatic variant NS NS Stage:I OR2F2 ENST00000408955 8247 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205488 c.229G>A p.V77I Substitution - Missense unk 7:143632554-143632554 + Confirmed somatic variant NS NS Stage:I OR2J3 ENST00000377169 8261 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184765 c.672C>T p.I224I Substitution - coding silent unk 6:29080339-29080339 + Confirmed somatic variant NS NS Stage:I OR2M5 ENST00000366476 19576 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210710 c.527A>G p.H176R Substitution - Missense unk 1:248308976-248308976 + Confirmed somatic variant NS NS Stage:I OR2T6 ENST00000355728 15018 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210723 c.451G>A p.G151S Substitution - Missense unk 1:248551360-248551360 + Confirmed somatic variant NS NS Stage:I OR51G1 ENST00000321961 14738 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179076 c.147C>T p.H49H Substitution - coding silent unk 11:4945423-4945423 - Confirmed somatic variant NS NS Stage:I OR52N4 ENST00000317254 15230 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179262 c.401A>T p.Y134F Substitution - Missense unk 11:5776371-5776371 + Confirmed somatic variant NS NS Stage:I OR52N5 ENST00000317093 15231 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179272 c.701C>T p.A234V Substitution - Missense unk 11:5799164-5799164 - Confirmed somatic variant NS NS Stage:I OR5H14 ENST00000383696 31286 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199320 c.308C>T p.S103L Substitution - Missense unk 3:97868537-97868537 + Confirmed somatic variant NS NS Stage:I OR6S1 ENST00000320704 15363 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182678 c.43G>A p.V15I Substitution - Missense unk 14:21109808-21109808 - Confirmed somatic variant NS NS Stage:I OSBPL10 ENST00000396555 16395 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185489 c.391C>T p.L131L Substitution - coding silent unk 3:31921213-31921213 - Confirmed somatic variant NS NS Stage:I OSBPL10_ENST00000396556 ENST00000396556 16395 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185490 c.391C>T p.L131L Substitution - coding silent unk 3:31921213-31921213 - Confirmed somatic variant NS NS Stage:I OSBPL3 NM_015550.2 16370 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183811 c.2482C>T p.Q828* Substitution - Nonsense unk 7:24844019-24844019 - Confirmed somatic variant NS NS Stage:I OSCAR ENST00000359649 29960 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192997 c.729G>A p.P243P Substitution - coding silent unk 19:54599075-54599075 - Confirmed somatic variant NS NS Stage:I OTX1 ENST00000282549 8521 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193825 c.303C>T p.S101S Substitution - coding silent unk 2:63282689-63282689 + Confirmed somatic variant NS NS Stage:I P4HA2 ENST00000166534 8547 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204062 c.555G>A p.T185T Substitution - coding silent unk 5:131546131-131546131 - Confirmed somatic variant NS NS Stage:I PAH ENST00000307000 8582 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199873 c.884C>G p.S295* Substitution - Nonsense unk 12:103245493-103245493 - Confirmed somatic variant NS NS Stage:I PAIP2B ENST00000244221 29200 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195446 c.107G>T p.W36L Substitution - Missense unk 2:71429613-71429613 - Confirmed somatic variant NS NS Stage:I PARVB NM_001003828.1 14653 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188519 c.752A>G p.H251R Substitution - Missense unk 22:44532359-44532359 + Confirmed somatic variant NS NS Stage:I PAXIP1 NM_007349.2 8624 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206826 c.2293C>T p.P765S Substitution - Missense unk 7:154752642-154752642 - Confirmed somatic variant NS NS Stage:I PCDH11X NM_032968.2 8656 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198229 c.91C>T p.R31* Substitution - Nonsense unk 23:91090594-91090594 + Confirmed somatic variant NS NS Stage:I PCDH11X_ENST00000395337 ENST00000395337 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198230 c.91C>T p.R31* Substitution - Nonsense unk 23:91090594-91090594 + Confirmed somatic variant NS NS Stage:I PCDH12 ENST00000231484 8657 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205340 c.3175G>T p.A1059S Substitution - Missense unk 5:141325326-141325326 - Confirmed somatic variant NS NS Stage:I PCDH12 ENST00000231484 8657 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205342 c.1884G>A p.S628S Substitution - coding silent unk 5:141335533-141335533 - Confirmed somatic variant NS NS Stage:I PCDH15 ENST00000361849 14674 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192015 c.4281G>A p.P1427P Substitution - coding silent unk 10:55587239-55587239 - Confirmed somatic variant NS NS Stage:I PCDH15_ENST00000417177 ENST00000417177 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192016 c.4296G>A p.P1432P Substitution - coding silent unk 10:55587239-55587239 - Confirmed somatic variant NS NS Stage:I PCDHB12 ENST00000239450 8683 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205181 c.183G>A p.S61S Substitution - coding silent unk 5:140588662-140588662 + Confirmed somatic variant NS NS Stage:I PCDHB12 ENST00000239450 8683 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205183 c.1630G>A p.E544K Substitution - Missense unk 5:140590109-140590109 + Confirmed somatic variant NS NS Stage:I PCDHB3 ENST00000231130 8688 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205128 c.538G>A p.V180I Substitution - Missense unk 5:140480771-140480771 + Confirmed somatic variant NS NS Stage:I PCDHB4 ENST00000194152 8689 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205135 c.1631C>T p.A544V Substitution - Missense unk 5:140503211-140503211 + Confirmed somatic variant NS NS Stage:I PCDHGC4 ENST00000306593 8717 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205280 c.686G>A p.R229Q Substitution - Missense unk 5:140865426-140865426 + Confirmed somatic variant NS NS Stage:I PCID2 ENST00000246505 25653 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201422 c.1224C>T p.D408D Substitution - coding silent unk 13:113833328-113833328 - Confirmed somatic variant NS NS Stage:I PDCD6IP NM_013374.3 8766 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186034 c.2286G>A p.V762V Substitution - coding silent unk 3:33906776-33906776 + Confirmed somatic variant NS NS Stage:I PDE3A ENST00000359062 8778 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182729 c.573G>A p.A191A Substitution - coding silent unk 12:20522791-20522791 + Confirmed somatic variant NS NS Stage:I PDGFD NM_025208.3 30620 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200160 c.805C>T p.R269C Substitution - Missense unk 11:103797822-103797822 - Confirmed somatic variant NS NS Stage:I PDGFD_ENST00000393158 ENST00000393158 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200161 c.805C>T p.R269C Substitution - Missense unk 11:103797822-103797822 - Confirmed somatic variant NS NS Stage:I PGM1 NM_002633.2 8905 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193998 c.337A>G p.I113V Substitution - Missense unk 1:64095186-64095186 + Confirmed somatic variant NS NS Stage:I PGPEP1L ENST00000378919 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199003 c.118G>A p.G40R Substitution - Missense unk 15:99514291-99514291 - Confirmed somatic variant NS NS Stage:I PHF15 ENST00000395003 22984 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204365 c.606C>T p.C202C Substitution - coding silent unk 5:133896569-133896569 + Confirmed somatic variant NS NS Stage:I PIGL NM_004278.2 8966 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181761 c.492G>T p.V164V Substitution - coding silent unk 17:16216926-16216926 + Confirmed somatic variant NS NS Stage:I PIK3C2A NM_002645.1 8971 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181945 c.596C>A p.P199H Substitution - Missense unk 11:17190693-17190693 - Confirmed somatic variant NS NS Stage:I PIK3CA NM_006218.1 8975 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 775 c.3140A>G p.H1047R Substitution - Missense unk 3:180434779-180434779 + 3:178952085-178952085 + Confirmed somatic variant NS NS Stage:I PIK3CG NM_002649.2 8978 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200486 c.820G>A p.V274I Substitution - Missense unk 7:106508826-106508826 + Confirmed somatic variant NS NS Stage:I PIK3R2 NM_005027.2 8980 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182174 c.909G>A p.P303P Substitution - coding silent unk 19:18273019-18273019 + Confirmed somatic variant NS NS Stage:I PITX3 NM_005029.3 9006 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200230 c.150C>T p.G50G Substitution - coding silent unk 10:103991516-103991516 - Confirmed somatic variant NS NS Stage:I PIWIL3 ENST00000332271 18443 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183421 c.2216C>T p.A739V Substitution - Missense unk 22:25120896-25120896 - Confirmed somatic variant NS NS Stage:I PKHD1L1 ENST00000378402 20313 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201089 c.12095C>T p.A4032V Substitution - Missense unk 8:110534466-110534466 + Confirmed somatic variant NS NS Stage:I PLCB3 NM_000932.1 9056 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193985 c.2058C>T p.N686N Substitution - coding silent unk 11:64029898-64029898 + Confirmed somatic variant NS NS Stage:I PLEKHG6 NM_018173.1 25562 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179436 c.424G>A p.E142K Substitution - Missense unk 12:6424300-6424300 + Confirmed somatic variant NS NS Stage:I PLXND1 ENST00000324093 9107 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203942 c.5640C>T p.Y1880Y Substitution - coding silent unk 3:129275481-129275481 - Confirmed somatic variant NS NS Stage:I PM20D1 ENST00000367136 26518 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209640 c.803G>A p.G268D Substitution - Missense unk 1:205812819-205812819 - Confirmed somatic variant NS NS Stage:I PMS2 NM_000535.2 9122 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179346 c.993C>T p.C331C Substitution - coding silent unk 7:6029582-6029582 - Confirmed somatic variant NS NS Stage:I POLN NM_181808.1 18870 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178319 c.1545A>T p.S515S Substitution - coding silent unk 4:2172415-2172415 - Confirmed somatic variant NS NS Stage:I POLR3B ENST00000228347 30348 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200399 c.1082G>A p.R361Q Substitution - Missense unk 12:106804719-106804719 + Confirmed somatic variant NS NS Stage:I POMGNT1 ENST00000371984 19139 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189550 c.795C>T p.R265R Substitution - coding silent unk 1:46660030-46660030 - Confirmed somatic variant NS NS Stage:I POPDC3 ENST00000254765 17649 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200433 c.333G>A p.L111L Substitution - coding silent unk 6:105609452-105609452 - Confirmed somatic variant NS NS Stage:I POU2F1 ENST00000367866 9212 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207603 c.2199G>A p.A733A Substitution - coding silent unk 1:167385014-167385014 + Confirmed somatic variant NS NS Stage:I POU5F1 NM_002701.3 9221 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185287 c.75G>A p.P25P Substitution - coding silent unk 6:31138323-31138323 - Confirmed somatic variant NS NS Stage:I PPARD NM_006238.2 9235 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186356 c.1083G>A p.R361R Substitution - coding silent unk 6:35393613-35393613 + Confirmed somatic variant NS NS Stage:I PPAT ENST00000264220 9238 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192575 c.499C>A p.P167T Substitution - Missense unk 4:57269471-57269471 - Confirmed somatic variant NS NS Stage:I PPFIA4 XM_046751.7 9248 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209514 c.3147A>G p.S1049S Substitution - coding silent unk 1:203029509-203029509 + Confirmed somatic variant NS NS Stage:I PPFIBP1 NM_003622.2 9249 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184473 c.2174T>C p.I725T Substitution - Missense unk 12:27835563-27835563 + Confirmed somatic variant NS NS Stage:I PPFIBP1_ENST00000318304 ENST00000318304 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184474 c.2192T>C p.I731T Substitution - Missense unk 12:27835563-27835563 + Confirmed somatic variant NS NS Stage:I PPM1A NM_021003.2 9275 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193083 c.424A>G p.I142V Substitution - Missense unk 14:60749845-60749845 + Confirmed somatic variant NS NS Stage:I PPP1R13B NM_015316.1 14950 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200149 c.3132C>T p.D1044D Substitution - coding silent unk 14:104202439-104202439 - Confirmed somatic variant NS NS Stage:I PPP1R15A NM_014330.2 14375 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191654 c.849A>T p.E283D Substitution - Missense unk 19:49377339-49377339 + Confirmed somatic variant NS NS Stage:I PPP1R7 NM_002712.1 9295 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210632 c.603C>T p.I201I Substitution - coding silent unk 2:242102705-242102705 + Confirmed somatic variant NS NS Stage:I PPP2R2B NM_181676.1 9305 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205702 c.820C>T p.P274S Substitution - Missense unk 5:145980003-145980003 - Confirmed somatic variant NS NS Stage:I PPP2R3A NM_002718.3 9307 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204720 c.2601G>A p.S867S Substitution - coding silent unk 3:135797265-135797265 + Confirmed somatic variant NS NS Stage:I PPP2R5B NM_006244.2 9310 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194109 c.566A>G p.Y189C Substitution - Missense unk 11:64695605-64695605 + Confirmed somatic variant NS NS Stage:I PQLC2 ENST00000375155 26001 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182507 c.106G>A p.E36K Substitution - Missense unk 1:19644277-19644277 + Confirmed somatic variant NS NS Stage:I PRAF2 NM_007213.1 28911 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190368 c.351G>A p.A117A Substitution - coding silent unk 23:48930138-48930138 - Confirmed somatic variant NS NS Stage:I PRAME ENST00000398741 9336 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182984 c.1505T>G p.L502R Substitution - Missense unk 22:22890514-22890514 - Confirmed somatic variant NS NS Stage:I PRDM12 ENST00000253008 13997 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204207 c.540C>T p.I180I Substitution - coding silent unk 9:133543670-133543670 + Confirmed somatic variant NS NS Stage:I PRDM15 ENST00000269844 13999 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188327 c.3127C>T p.R1043C Substitution - Missense unk 21:43241454-43241454 - Confirmed somatic variant NS NS Stage:I PREP ENST00000369110 9358 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200447 c.2040C>T p.H680H Substitution - coding silent unk 6:105726112-105726112 - Confirmed somatic variant NS NS Stage:I PRICKLE1 ENST00000345127 17019 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188041 c.706C>T p.R236C Substitution - Missense unk 12:42860065-42860065 - Confirmed somatic variant NS NS Stage:I PRICKLE4 ENST00000394263 16805 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188268 c.1077T>C p.L359L Substitution - coding silent unk 6:41754789-41754789 + Confirmed somatic variant NS NS Stage:I PRKCQ NM_006257 9410 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179491 c.2021G>A p.R674Q Substitution - Missense unk 10:6470269-6470269 - Confirmed somatic variant NS NS Stage:I PRKDC NM_006904 9413 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190396 c.8726G>A p.R2909Q Substitution - Missense unk 8:48739274-48739274 - Confirmed somatic variant NS NS Stage:I PRPF4 ENST00000374198 17349 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201781 c.1340C>T p.A447V Substitution - Missense unk 9:116053261-116053261 + Confirmed somatic variant NS NS Stage:I PRSS1 ENST00000290968 9475 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205397 c.375C>T p.T125T Substitution - coding silent unk 7:142459799-142459799 + Confirmed somatic variant NS NS Stage:I PRSS45 ENST00000442359 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189698 c.647T>A p.L216Q Substitution - Missense unk 3:46783880-46783880 - Confirmed somatic variant NS NS Stage:I PSG3 ENST00000327495 9520 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190072 c.526G>A p.A176T Substitution - Missense unk 19:43237119-43237119 - Confirmed somatic variant NS NS Stage:I PSMB9 ENST00000374859 9546 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185788 c.167C>T p.P56L Substitution - Missense unk 6:32825078-32825078 + Confirmed somatic variant NS NS Stage:I PTCHD1 NM_173495.1 26392 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183393 c.1354G>T p.G452W Substitution - Missense unk 23:23411304-23411304 + Confirmed somatic variant NS NS Stage:I PTCHD3 ENST00000329227 24776 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184477 c.1280T>G p.V427G Substitution - Missense unk 10:27692218-27692218 - Confirmed somatic variant NS NS Stage:I PTK2 NM_005607 9611 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205372 c.3212C>T p.T1071M Substitution - Missense unk 8:141669578-141669578 - Confirmed somatic variant NS NS Stage:I PTK2 NM_005607 9611 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205379 c.2537G>A p.R846H Substitution - Missense unk 8:141711018-141711018 - Confirmed somatic variant NS NS Stage:I PTK2_ENST00000395214 ENST00000395214 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205374 c.3011C>T p.T1004M Substitution - Missense unk 8:141669578-141669578 - Confirmed somatic variant NS NS Stage:I PTK2_ENST00000395214 ENST00000395214 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205381 c.2327G>A p.R776H Substitution - Missense unk 8:141711018-141711018 - Confirmed somatic variant NS NS Stage:I PTK2_ENST00000395218 ENST00000395218 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205373 c.3185C>T p.T1062M Substitution - Missense unk 8:141669578-141669578 - Confirmed somatic variant NS NS Stage:I PTK2_ENST00000395218 ENST00000395218 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205380 c.2471G>A p.R824H Substitution - Missense unk 8:141711018-141711018 - Confirmed somatic variant NS NS Stage:I PTPN21 NM_007039.2 9651 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 140040 c.1169G>A p.R390H Substitution - Missense unk 14:88946606-88946606 - Confirmed somatic variant NS NS Stage:I PTPRC NM_002838.2 9666 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209365 c.1823G>A p.C608Y Substitution - Missense unk 1:198697577-198697577 + Confirmed somatic variant NS NS Stage:I PTPRF NM_002840.2 9670 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188826 c.2124G>T p.E708D Substitution - Missense unk 1:44064425-44064425 + Confirmed somatic variant NS NS Stage:I PTPRJ NM_002843.2 9673 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190113 c.1688C>T p.P563L Substitution - Missense unk 11:48157663-48157663 + Confirmed somatic variant NS NS Stage:I PVRL4 ENST00000368012 19688 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207316 c.608C>T p.A203V Substitution - Missense unk 1:161047365-161047365 - Confirmed somatic variant NS NS Stage:I PXDN ENST00000252804 14966 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178227 c.3481C>T p.R1161W Substitution - Missense unk 2:1652071-1652071 - Confirmed somatic variant NS NS Stage:I PXDNL ENST00000356297 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191281 c.364G>C p.G122R Substitution - Missense unk 8:52321417-52321417 - Confirmed somatic variant NS NS Stage:I Q6YL47_HUMAN ENST00000322367 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178413 c.4801G>A p.A1601T Substitution - Missense unk 12:2800144-2800144 + Confirmed somatic variant NS NS Stage:I Q8N8K0_HUMAN ENST00000301807 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186754 c.6961G>A p.A2321T Substitution - Missense unk 3:36871100-36871100 - Confirmed somatic variant NS NS Stage:I QPRT ENST00000219771 9755 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184845 c.7G>A p.A3T Substitution - Missense unk 16:29690525-29690525 + Confirmed somatic variant NS NS Stage:I R3HDM2 ENST00000393811 29167 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192292 c.287C>T p.A96V Substitution - Missense unk 12:57663776-57663776 - Confirmed somatic variant NS NS Stage:I R3HDM2_ENST00000347140 ENST00000347140 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192293 c.1304C>T p.A435V Substitution - Missense unk 12:57663776-57663776 - Confirmed somatic variant NS NS Stage:I RAB7L1 NM_003929.1 9789 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209636 c.235C>T p.R79W Substitution - Missense unk 1:205740743-205740743 - Confirmed somatic variant NS NS Stage:I RAG1 NM_000448.1 9831 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186659 c.125C>A p.P42H Substitution - Missense unk 11:36594979-36594979 + Confirmed somatic variant NS NS Stage:I RAI14 ENST00000265109 14873 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186180 c.535A>G p.N179D Substitution - Missense unk 5:34811201-34811201 + Confirmed somatic variant NS NS Stage:I RANBP17 ENST00000389118 14428 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207991 c.534C>A p.T178T Substitution - coding silent unk 5:170336709-170336709 + Confirmed somatic variant NS NS Stage:I RARB NM_000965.2 9865 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183977 c.628C>T p.R210* Substitution - Nonsense unk 3:25622055-25622055 + Confirmed somatic variant NS NS Stage:I RASGRF1 NM_002891.3 9875 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196572 c.3084C>T p.G1028G Substitution - coding silent unk 15:79284128-79284128 - Confirmed somatic variant NS NS Stage:I RASGRF2 NM_006909.1 9876 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197018 c.2773T>C p.W925R Substitution - Missense unk 5:80476080-80476080 + Confirmed somatic variant NS NS Stage:I RASSF8 ENST00000381352 13232 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184057 c.435A>C p.K145N Substitution - Missense unk 12:26217762-26217762 + Confirmed somatic variant NS NS Stage:I RBFOX1 ENST00000355637 18222 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179800 c.266C>T p.A89V Substitution - Missense unk 16:7568327-7568327 + Confirmed somatic variant NS NS Stage:I RBFOX1_ENST00000311745 ENST00000311745 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179801 c.266C>T p.A89V Substitution - Missense unk 16:7568327-7568327 + Confirmed somatic variant NS NS Stage:I RBFOX2 ENST00000262829 9906 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186131 c.1100C>T p.T367M Substitution - Missense unk 22:36140246-36140246 - Confirmed somatic variant NS NS Stage:I RBFOX2 ENST00000262829 9906 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186136 c.796G>A p.A266T Substitution - Missense unk 22:36156026-36156026 - Confirmed somatic variant NS NS Stage:I RBM15_ENST00000369784 ENST00000369784_v62 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201105 c.2663T>A p.L888H Substitution - Missense unk 1:110884690-110884690 + Confirmed somatic variant NS NS Stage:I RCBTB1 ENST00000378302 18243 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190458 c.355G>A p.V119I Substitution - Missense unk 13:50134143-50134143 - Confirmed somatic variant NS NS Stage:I RCE1 NM_005133.2 13721 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194463 c.819C>T p.C273C Substitution - coding silent unk 11:66613395-66613395 + Confirmed somatic variant NS NS Stage:I RCOR3 ENST00000367005 25594 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209803 c.1166G>A p.R389Q Substitution - Missense unk 1:211486788-211486788 + Confirmed somatic variant NS NS Stage:I RECQL5 NM_004259.4 9950 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195403 c.1638A>C p.E546D Substitution - Missense unk 17:73626357-73626357 - Confirmed somatic variant NS NS Stage:I RETSAT ENST00000295802 25991 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197484 c.1105C>T p.R369C Substitution - Missense unk 2:85573110-85573110 - Confirmed somatic variant NS NS Stage:I REV3L NM_002912.1 9968 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201223 c.8356C>A p.P2786T Substitution - Missense unk 6:111634569-111634569 - Confirmed somatic variant NS NS Stage:I REXO4 ENST00000371942 12820 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204532 c.855C>T p.P285P Substitution - coding silent unk 9:136277474-136277474 - Confirmed somatic variant NS NS Stage:I RFPL3 ENST00000397468 9980 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185233 c.752G>A p.R251H Substitution - Missense unk 22:32756704-32756704 + Confirmed somatic variant NS NS Stage:I RFPL3_ENST00000249007 ENST00000249007 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185234 c.839G>A p.R280H Substitution - Missense unk 22:32756704-32756704 + Confirmed somatic variant NS NS Stage:I RFWD2 AF508940.1 17440 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208169 c.1510C>T p.Q504* Substitution - Nonsense unk 1:176012866-176012866 - Confirmed somatic variant NS NS Stage:I RGS14 NM_006480.4 9996 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208269 c.572G>A p.R191H Substitution - Missense unk 5:176794503-176794503 + Confirmed somatic variant NS NS Stage:I RGS20 NM_170587.1 14600 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191892 c.201C>T p.A67A Substitution - coding silent unk 8:54791853-54791853 + Confirmed somatic variant NS NS Stage:I RHCE ENST00000294413 10008 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183970 c.1011G>A p.L337L Substitution - coding silent unk 1:25712264-25712264 - Confirmed somatic variant NS NS Stage:I RILPL2 ENST00000280571 28787 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202744 c.433C>T p.R145C Substitution - Missense unk 12:123915113-123915113 - Confirmed somatic variant NS NS Stage:I RNF123 NM_022064.2 21148 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190658 c.530G>A p.R177H Substitution - Missense unk 3:49735919-49735919 + Confirmed somatic variant NS NS Stage:I RNF14 NM_004290.3 10058 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205345 c.92T>C p.V31A Substitution - Missense unk 5:141353245-141353245 + Confirmed somatic variant NS NS Stage:I RNF150 XM_371709.3 23138 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205415 c.23G>A p.R8H Substitution - Missense unk 4:142053667-142053667 - Confirmed somatic variant NS NS Stage:I RNF150_ENST00000515673 ENST00000515673 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205416 c.296G>A p.R99H Substitution - Missense unk 4:142053667-142053667 - Confirmed somatic variant NS NS Stage:I RNF152 NM_173557.1 26811 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192745 c.306G>A p.L102L Substitution - coding silent unk 18:59483391-59483391 - Confirmed somatic variant NS NS Stage:I RNF34 NM_194271.1 17297 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202465 c.941G>A p.R314Q Substitution - Missense unk 12:121861198-121861198 + Confirmed somatic variant NS NS Stage:I RP1 ENST00000220676 10263 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192195 c.4328G>A p.R1443Q Substitution - Missense unk 8:55540770-55540770 + Confirmed somatic variant NS NS Stage:I RP9 ENST00000297157 10288 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185842 c.283C>T p.P95S Substitution - Missense unk 7:33138949-33138949 - Confirmed somatic variant NS NS Stage:I RPA1 NM_002945.2 10289 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178243 c.1493A>G p.Y498C Substitution - Missense unk 17:1792087-1792087 + Confirmed somatic variant NS NS Stage:I RPL23 NM_000978.3 10316 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186110 c.279C>T p.G93G Substitution - coding silent unk 17:37006676-37006676 - Confirmed somatic variant NS NS Stage:I RPS6KA3 NM_004586 10432 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182647 c.1840G>A p.G614S Substitution - Missense unk 23:20181083-20181083 - Confirmed somatic variant NS NS Stage:I RPS6KB2 NM_003952 10437 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194548 c.673G>A p.V225I Substitution - Missense unk 11:67200479-67200479 + Confirmed somatic variant NS NS Stage:I RPS6KB2_ENST00000312629 ENST00000312629 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194549 c.673G>A p.V225I Substitution - Missense unk 11:67200479-67200479 + Confirmed somatic variant NS NS Stage:I RTEL1 ENST00000370018 15888 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193500 c.30C>T p.T10T Substitution - coding silent unk 20:62290785-62290785 + Confirmed somatic variant NS NS Stage:I RTN1 ENST00000267484 10467 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192993 c.1540C>T p.R514W Substitution - Missense unk 14:60193862-60193862 - Confirmed somatic variant NS NS Stage:I RYR1 ENST00000359596 10483 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188804 c.14725G>A p.E4909K Substitution - Missense unk 19:39075661-39075661 + Confirmed somatic variant NS NS Stage:I SAGE1 OTTHUMT00000058448.1 30369 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204458 c.635A>G p.E212G Substitution - Missense unk 23:134988609-134988609 + Confirmed somatic variant NS NS Stage:I SAG_ENST00000409110 ENST00000409110_v65 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210405 c.232G>A p.V78M Substitution - Missense unk 2:234229326-234229326 + Confirmed somatic variant NS NS Stage:I SAMD10 ENST00000369886 16129 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193577 c.409G>A p.V137I Substitution - Missense unk 20:62608360-62608360 - Confirmed somatic variant NS NS Stage:I SBF1 ENST00000390679 10542 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190521 c.5522G>A p.R1841H Substitution - Missense unk 22:50885653-50885653 - Confirmed somatic variant NS NS Stage:I SCAF4 ENST00000286835 19304 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185510 c.2636G>A p.R879H Substitution - Missense unk 21:33044520-33044520 - Confirmed somatic variant NS NS Stage:I SCD ENST00000370355 10571 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199952 c.66G>A p.A22A Substitution - coding silent unk 10:102107859-102107859 + Confirmed somatic variant NS NS Stage:I SCD ENST00000370355 10571 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199956 c.985G>A p.A329T Substitution - Missense unk 10:102120595-102120595 + Confirmed somatic variant NS NS Stage:I SCHIP1 ENST00000337808 15678 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207458 c.1041G>T p.E347D Substitution - Missense unk 3:159605541-159605541 + Confirmed somatic variant NS NS Stage:I SCLY ENST00000254663 18161 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210569 c.1262G>A p.S421N Substitution - Missense unk 2:239006920-239006920 + Confirmed somatic variant NS NS Stage:I SCMH1 ENST00000372597 19003 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188070 c.1601G>A p.R534Q Substitution - Missense unk 1:41494305-41494305 - Confirmed somatic variant NS NS Stage:I SCMH1_ENST00000337495 ENST00000337495 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188071 c.1772G>A p.R591Q Substitution - Missense unk 1:41494305-41494305 - Confirmed somatic variant NS NS Stage:I SCML4 ENST00000369020 21397 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200745 c.719G>A p.C240Y Substitution - Missense unk 6:108042074-108042074 - Confirmed somatic variant NS NS Stage:I SCN1A ENST00000375405 10585 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207684 c.3354G>A p.T1118T Substitution - coding silent unk 2:166892600-166892600 - Confirmed somatic variant NS NS Stage:I SCN2A ENST00000375427 10588 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207631 c.5450A>G p.K1817R Substitution - Missense unk 2:166245766-166245766 + Confirmed somatic variant NS NS Stage:I SCN3A ENST00000283254 10590 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207605 c.4763G>C p.G1588A Substitution - Missense unk 2:165948808-165948808 - Confirmed somatic variant NS NS Stage:I SCN3A ENST00000283254 10590 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207613 c.1862G>A p.R621H Substitution - Missense unk 2:165997318-165997318 - Confirmed somatic variant NS NS Stage:I SCN8A_ENST00000354534 ENST00000354534_v65 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190832 c.2166C>T p.C722C Substitution - coding silent unk 12:52145173-52145173 + Confirmed somatic variant NS NS Stage:I SCNM1 ENST00000368905 23136 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205978 c.649T>C p.F217L Substitution - Missense unk 1:151141517-151141517 + Confirmed somatic variant NS NS Stage:I SCNN1G ENST00000300061 10602 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183337 c.48C>T p.P16P Substitution - coding silent unk 16:23197640-23197640 + Confirmed somatic variant NS NS Stage:I SDF2 ENST00000247020 10675 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183607 c.353T>C p.V118A Substitution - Missense unk 17:26976290-26976290 - Confirmed somatic variant NS NS Stage:I SDK1 ENST00000389531 19307 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178890 c.4004C>T p.T1335M Substitution - Missense unk 7:4169604-4169604 + Confirmed somatic variant NS NS Stage:I SDK1 ENST00000389531 19307 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178896 c.4718C>T p.T1573M Substitution - Missense unk 7:4198172-4198172 + Confirmed somatic variant NS NS Stage:I SDK1 ENST00000389531 19307 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178899 c.5799G>A p.T1933T Substitution - coding silent unk 7:4260968-4260968 + Confirmed somatic variant NS NS Stage:I SEC16A ENST00000313050 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204831 c.1891G>A p.V631M Substitution - Missense unk 9:139370177-139370177 - Confirmed somatic variant NS NS Stage:I SEC63 NM_007214.3 21082 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200768 c.733C>T p.R245C Substitution - Missense unk 6:108230131-108230131 - Confirmed somatic variant NS NS Stage:I SECISBP2 ENST00000375807 30972 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198253 c.156G>A p.P52P Substitution - coding silent unk 9:91934686-91934686 + Confirmed somatic variant NS NS Stage:I SEMA4D ENST00000343780 10732 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198274 c.755G>A p.R252Q Substitution - Missense unk 9:92006198-92006198 - Confirmed somatic variant NS NS Stage:I SERINC2 ENST00000373709 23231 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185403 c.280T>C p.Y94H Substitution - Missense unk 1:31897608-31897608 + Confirmed somatic variant NS NS Stage:I SERP1 ENST00000239944 10759 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206304 c.194G>T p.G65V Substitution - Missense unk 3:150262252-150262252 - Confirmed somatic variant NS NS Stage:I SERP2 ENST00000379179 20607 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188829 c.120G>C p.W40C Substitution - Missense unk 13:44953812-44953812 + Confirmed somatic variant NS NS Stage:I SERPINA4 NM_006215.2 8948 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198580 c.819C>T p.D273D Substitution - coding silent unk 14:95033476-95033476 + Confirmed somatic variant NS NS Stage:I SETD1A ENST00000262519 29010 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185184 c.3394C>T p.R1132C Substitution - Missense unk 16:30990501-30990501 + Confirmed somatic variant NS NS Stage:I SETD7 ENST00000274031 30412 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205197 c.344G>A p.R115H Substitution - Missense unk 4:140454347-140454347 - Confirmed somatic variant NS NS Stage:I SETX ENST00000224140 445 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204387 c.1653G>A p.Q551Q Substitution - coding silent unk 9:135205332-135205332 - Confirmed somatic variant NS NS Stage:I SFPQ ENST00000357214 10774 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186343 c.1465G>A p.E489K Substitution - Missense unk 1:35654934-35654934 - Confirmed somatic variant NS NS Stage:I SFRP1_ENST00000220772 ENST00000220772 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188080 c.417G>A p.S139S Substitution - coding silent unk 8:41166262-41166262 - Confirmed somatic variant NS NS Stage:I SFRP4 NM_003014.2 10778 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187072 c.48G>A p.A16A Substitution - coding silent unk 7:37956092-37956092 - Confirmed somatic variant NS NS Stage:I SG223_HUMAN ENST00000330777 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180039 c.2138C>A p.P713H Substitution - Missense unk 8:8233781-8233781 - Confirmed somatic variant NS NS Stage:I SGSM1 ENST00000400358 29410 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183487 c.2898G>A p.T966T Substitution - coding silent unk 22:25308689-25308689 + Confirmed somatic variant NS NS Stage:I SH3KBP1 NM_031892.1 13867 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182506 c.1286T>C p.L429P Substitution - Missense unk 23:19606773-19606773 - Confirmed somatic variant NS NS Stage:I SHF ENST00000290894 25116 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188622 c.851G>A p.R284Q Substitution - Missense unk 15:45464459-45464459 - Confirmed somatic variant NS NS Stage:I SHMT2 ENST00000328923 10852 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192280 c.523G>A p.G175S Substitution - Missense unk 12:57626004-57626004 + Confirmed somatic variant NS NS Stage:I SHROOM4 XM_050478.2 29215 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190822 c.1770C>A p.T590T Substitution - coding silent unk 23:50377303-50377303 - Confirmed somatic variant NS NS Stage:I SIAH2 NM_005067.4 10858 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206344 c.883G>A p.D295N Substitution - Missense unk 3:150460020-150460020 - Confirmed somatic variant NS NS Stage:I SIDT2 ENST00000324225 24272 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201937 c.2332G>A p.A778T Substitution - Missense unk 11:117066527-117066527 + Confirmed somatic variant NS NS Stage:I SIGLEC9 ENST00000250360 10878 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192398 c.614A>G p.Q205R Substitution - Missense unk 19:51629046-51629046 + Confirmed somatic variant NS NS Stage:I SIK1 NM_173354 11142 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188772 c.372C>T p.N124N Substitution - coding silent unk 21:44841645-44841645 - Confirmed somatic variant NS NS Stage:I SIPA1L1 ENST00000358550 20284 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195392 c.173G>A p.R58Q Substitution - Missense unk 14:72054762-72054762 + Confirmed somatic variant NS NS Stage:I SIX1 ENST00000247182 10887 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193159 c.775G>A p.G259S Substitution - Missense unk 14:61113081-61113081 - Confirmed somatic variant NS NS Stage:I SKIP ENST00000320345 33882 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178159 c.559C>T p.R187C Substitution - Missense unk 17:1401406-1401406 - Confirmed somatic variant NS NS Stage:I SKP1 NM_170679.1 10899 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204313 c.411G>T p.K137N Substitution - Missense unk 5:133494191-133494191 - Confirmed somatic variant NS NS Stage:I SLC12A1 ENST00000380993 10910 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189519 c.1686G>A p.A562A Substitution - coding silent unk 15:48541773-48541773 + Confirmed somatic variant NS NS Stage:I SLC12A5 ENST00000243964 13818 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188914 c.2338C>T p.R780C Substitution - Missense unk 20:44680470-44680470 + Confirmed somatic variant NS NS Stage:I SLC16A2 NM_006517.1 10923 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195927 c.874G>A p.V292I Substitution - Missense unk 23:73744270-73744270 + Confirmed somatic variant NS NS Stage:I SLC17A3 ENST00000360657 10931 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184025 c.1174G>A p.V392I Substitution - Missense unk 6:25845699-25845699 - Confirmed somatic variant NS NS Stage:I SLC17A4 ENST00000377905 10932 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184012 c.53G>A p.G18D Substitution - Missense unk 6:25762243-25762243 + Confirmed somatic variant NS NS Stage:I SLC18A1 ENST00000276373 10934 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182643 c.480C>G p.L160L Substitution - coding silent unk 8:20036640-20036640 - Confirmed somatic variant NS NS Stage:I SLC19A1 ENST00000311124 10937 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189396 c.838G>A p.G280S Substitution - Missense unk 21:46951414-46951414 - Confirmed somatic variant NS NS Stage:I SLC22A10 ENST00000332793 18057 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193771 c.143G>A p.R48H Substitution - Missense unk 11:63057780-63057780 + Confirmed somatic variant NS NS Stage:I SLC22A14 ENST00000273173 8495 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187212 c.734C>T p.S245L Substitution - Missense unk 3:38349170-38349170 + Confirmed somatic variant NS NS Stage:I SLC22A25 ENST00000306494 32935 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193743 c.573C>T p.A191A Substitution - coding silent unk 11:62985141-62985141 - Confirmed somatic variant NS NS Stage:I SLC22A3 ENST00000275300 10967 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207443 c.1658G>A p.R553H Substitution - Missense unk 6:160872075-160872075 + Confirmed somatic variant NS NS Stage:I SLC22A7 ENST00000372585 10971 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188660 c.970G>A p.A324T Substitution - Missense unk 6:43269339-43269339 + Confirmed somatic variant NS NS Stage:I SLC24A5 ENST00000341459 20611 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189494 c.896C>A p.P299H Substitution - Missense unk 15:48431190-48431190 + Confirmed somatic variant NS NS Stage:I SLC25A12 ENST00000263812 10982 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208091 c.1240C>T p.R414W Substitution - Missense unk 2:172666181-172666181 - Confirmed somatic variant NS NS Stage:I SLC30A3 ENST00000233535 11014 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184352 c.1017C>T p.I339I Substitution - coding silent unk 2:27479255-27479255 - Confirmed somatic variant NS NS Stage:I SLC35A3 ENST00000370155 11023 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199552 c.131T>C p.V44A Substitution - Missense unk 1:100459241-100459241 + Confirmed somatic variant NS NS Stage:I SLC35B2 ENST00000288373 16872 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188978 c.696G>T p.R232R Substitution - coding silent unk 6:44223046-44223046 - Confirmed somatic variant NS NS Stage:I SLC45A4 ENST00000024061 29196 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205426 c.35G>A p.R12H Substitution - Missense unk 8:142238331-142238331 - Confirmed somatic variant NS NS Stage:I SLC4A5 ENST00000357822 18168 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196041 c.2110G>A p.A704T Substitution - Missense unk 2:74469129-74469129 - Confirmed somatic variant NS NS Stage:I SLC7A6 ENST00000219343 11064 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194541 c.1260G>A p.R420R Substitution - coding silent unk 16:68330407-68330407 + Confirmed somatic variant NS NS Stage:I SLC7A8 ENST00000316902 11066 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183221 c.1308C>T p.F436F Substitution - coding silent unk 14:23597361-23597361 - Confirmed somatic variant NS NS Stage:I SLFN11 ENST00000394566 26633 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185108 c.2004C>T p.D668D Substitution - coding silent unk 17:33680077-33680077 - Confirmed somatic variant NS NS Stage:I SLIT1 ENST00000266058 11085 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199210 c.1610G>A p.R537H Substitution - Missense unk 10:98807471-98807471 - Confirmed somatic variant NS NS Stage:I SLITRK1 ENST00000377084 20297 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197286 c.390C>T p.D130D Substitution - coding silent unk 13:84455253-84455253 - Confirmed somatic variant NS NS Stage:I SLK_ENST00000369755 ENST00000369755 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200439 c.918G>T p.E306D Substitution - Missense unk 10:105761255-105761255 + Confirmed somatic variant NS NS Stage:I SLMAP ENST00000295951 16643 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192763 c.255G>A p.L85L Substitution - coding silent unk 3:57817166-57817166 + Confirmed somatic variant NS NS Stage:I SLTM ENST00000380516 20709 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192569 c.3001G>A p.A1001T Substitution - Missense unk 15:59172302-59172302 - Confirmed somatic variant NS NS Stage:I SMARCAL1 NM_014140.2 11102 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209986 c.443C>A p.A148D Substitution - Missense unk 2:217279870-217279870 + Confirmed somatic variant NS NS Stage:I SMC1A NM_006306.2 11111 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191478 c.2077C>T p.R693W Substitution - Missense unk 23:53432063-53432063 - Confirmed somatic variant NS NS Stage:I SMC4 NM_005496.2 14013 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207503 c.2114G>A p.R705H Substitution - Missense unk 3:160141307-160141307 + Confirmed somatic variant NS NS Stage:I SMC5 NM_015110.1 20465 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195621 c.767G>A p.R256Q Substitution - Missense unk 9:72895763-72895763 + Confirmed somatic variant NS NS Stage:I SMO NM_005631.3 11119 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203629 c.1302C>T p.P434P Substitution - coding silent unk 7:128848637-128848637 + Confirmed somatic variant NS NS Stage:I SMTNL1_ENST00000457912 ENST00000457912_v65 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192605 c.485C>T p.A162V Substitution - Missense unk 11:57310546-57310546 + Confirmed somatic variant NS NS Stage:I SNAP29 ENST00000215730 11133 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182516 c.8C>T p.A3V Substitution - Missense unk 22:21213406-21213406 + Confirmed somatic variant NS NS Stage:I SND1 ENST00000354725 30646 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203423 c.747A>T p.K249N Substitution - Missense unk 7:127343284-127343284 + Confirmed somatic variant NS NS Stage:I SORBS2 NM_021069.2 24098 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209091 c.1494G>A p.T498T Substitution - coding silent unk 4:186545077-186545077 - Confirmed somatic variant NS NS Stage:I SORBS2 NM_021069.2 24098 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209092 c.244G>A p.G82R Substitution - Missense unk 4:186578601-186578601 - Confirmed somatic variant NS NS Stage:I SORBS2_ENST00000448662 ENST00000448662 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209093 c.451G>A p.G151R Substitution - Missense unk 4:186578601-186578601 - Confirmed somatic variant NS NS Stage:I SORCS2 NM_020777.1 16698 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179927 c.2499C>T p.D833D Substitution - coding silent unk 4:7730156-7730156 + Confirmed somatic variant NS NS Stage:I SORCS3 ENST00000369701 16699 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200558 c.1650G>A p.L550L Substitution - coding silent unk 10:106918670-106918670 + Confirmed somatic variant NS NS Stage:I SOX21 ENST00000376945 11197 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198589 c.166C>T p.P56S Substitution - Missense unk 13:95364138-95364138 - Confirmed somatic variant NS NS Stage:I SP110 ENST00000258381 5401 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210345 c.1722C>T p.C574C Substitution - coding silent unk 2:231036875-231036875 - Confirmed somatic variant NS NS Stage:I SPOCK1 ENST00000394945 11251 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204660 c.316C>A p.L106M Substitution - Missense unk 5:136476300-136476300 - Confirmed somatic variant NS NS Stage:I SPOP NM_003563.3 11254 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189177 c.830C>T p.A277V Substitution - Missense unk 17:47684619-47684619 - Confirmed somatic variant NS NS Stage:I SPRY4 NM_030964.2 15533 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205368 c.304G>A p.A102T Substitution - Missense unk 5:141694439-141694439 - Confirmed somatic variant NS NS Stage:I SPTBN4 ENST00000352632 14896 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189393 c.5978C>T p.A1993V Substitution - Missense unk 19:41071391-41071391 + Confirmed somatic variant NS NS Stage:I SRRM1 ENST00000323848 16638 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183828 c.553C>T p.R185* Substitution - Nonsense unk 1:24977931-24977931 + Confirmed somatic variant NS NS Stage:I SSR1 ENST00000244763 11323 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179735 c.166G>C p.V56L Substitution - Missense unk 6:7310176-7310176 - Confirmed somatic variant NS NS Stage:I ST3GAL4 ENST00000392669 10864 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203235 c.363C>T p.N121N Substitution - coding silent unk 11:126278027-126278027 + Confirmed somatic variant NS NS Stage:I STAG3 NM_012447.2 11356 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199420 c.2545C>T p.P849S Substitution - Missense unk 7:99799945-99799945 + Confirmed somatic variant NS NS Stage:I STAM2 ENST00000263904 11358 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206542 c.1419T>C p.G473G Substitution - coding silent unk 2:152977247-152977247 - Confirmed somatic variant NS NS Stage:I STARD13 ENST00000336934 19164 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185712 c.1243C>A p.L415I Substitution - Missense unk 13:33703571-33703571 - Confirmed somatic variant NS NS Stage:I STC1 ENST00000290271 11373 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183524 c.603C>A p.H201Q Substitution - Missense unk 8:23702424-23702424 - Confirmed somatic variant NS NS Stage:I STS NM_000351.3 11425 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179718 c.539C>T p.T180M Substitution - Missense unk 23:7177531-7177531 + Confirmed somatic variant NS NS Stage:I STXBP5L ENST00000273666 30757 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202745 c.2125C>T p.R709C Substitution - Missense unk 3:121001127-121001127 + Confirmed somatic variant NS NS Stage:I SUN1 ENST00000389574 18587 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178086 c.1683T>C p.F561F Substitution - coding silent unk 7:905656-905656 + Confirmed somatic variant NS NS Stage:I SUPT16H ENST00000216297 11465 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182844 c.1410A>C p.A470A Substitution - coding silent unk 14:21831294-21831294 - Confirmed somatic variant NS NS Stage:I SUSD1 ENST00000374270 25413 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201586 c.1667T>C p.L556P Substitution - Missense unk 9:114840904-114840904 - Confirmed somatic variant NS NS Stage:I SYN2 ENST00000341648 11495 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180994 c.1280C>T p.S427L Substitution - Missense unk 3:12228986-12228986 + Confirmed somatic variant NS NS Stage:I SYNGR4 ENST00000344846 11502 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191500 c.28C>T p.L10L Substitution - coding silent unk 19:48869127-48869127 + Confirmed somatic variant NS NS Stage:I SYT3 ENST00000338916 11511 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192247 c.510T>C p.A170A Substitution - coding silent unk 19:51135707-51135707 - Confirmed somatic variant NS NS Stage:I SYT5 ENST00000354308 11513 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193197 c.461C>T p.P154L Substitution - Missense unk 19:55687156-55687156 - Confirmed somatic variant NS NS Stage:I SZT2 ENST00000372442 29040 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188778 c.3504G>A p.L1168L Substitution - coding silent unk 1:43903090-43903090 + Confirmed somatic variant NS NS Stage:I TAF2 NM_003184.2 11536 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202543 c.1975G>A p.V659I Substitution - Missense unk 8:120795758-120795758 - Confirmed somatic variant NS NS Stage:I TAF2_ENST00000378164 ENST00000378164 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202544 c.1975G>A p.V659I Substitution - Missense unk 8:120795758-120795758 - Confirmed somatic variant NS NS Stage:I TANC1 ENST00000263635 29364 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207347 c.2742G>A p.K914K Substitution - coding silent unk 2:160043535-160043535 + Confirmed somatic variant NS NS Stage:I TAP2_ENST00000458336 ENST00000458336 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185777 c.1600A>G p.I534V Substitution - Missense unk 6:32798079-32798079 - Confirmed somatic variant NS NS Stage:I TBC1D14 ENST00000340816 29246 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179676 c.917C>T p.A306V Substitution - Missense unk 4:6996029-6996029 + Confirmed somatic variant NS NS Stage:I TBC1D17 ENST00000221543 25699 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191938 c.1259T>C p.M420T Substitution - Missense unk 19:50387731-50387731 + Confirmed somatic variant NS NS Stage:I TBC1D22A ENST00000337137 1309 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189365 c.930G>A p.A310A Substitution - coding silent unk 22:47307999-47307999 + Confirmed somatic variant NS NS Stage:I TBL1XR1 NM_024665.3 29529 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208339 c.575C>T p.T192I Substitution - Missense unk 3:176767912-176767912 - Confirmed somatic variant NS NS Stage:I TBRG4 ENST00000258770 17443 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189191 c.469G>T p.G157C Substitution - Missense unk 7:45145306-45145306 - Confirmed somatic variant NS NS Stage:I TBX18 ENST00000369663 11595 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197492 c.867C>T p.S289S Substitution - coding silent unk 6:85457710-85457710 - Confirmed somatic variant NS NS Stage:I TBX22 NM_016954.2 11600 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196872 c.675C>T p.H225H Substitution - coding silent unk 23:79282244-79282244 + Confirmed somatic variant NS NS Stage:I TBX4 NM_018488.2 11603 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192555 c.1111C>A p.P371T Substitution - Missense unk 17:59560350-59560350 + Confirmed somatic variant NS NS Stage:I TBXAS1 ENST00000336425 11609 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204896 c.19T>C p.F7L Substitution - Missense unk 7:139529205-139529205 + Confirmed somatic variant NS NS Stage:I TCEA2 ENST00000339217 11614 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193591 c.94C>T p.R32W Substitution - Missense unk 20:62697850-62697850 + Confirmed somatic variant NS NS Stage:I TCIRG1 NM_006019.2 11647 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194620 c.1249G>A p.A417T Substitution - Missense unk 11:67814983-67814983 + Confirmed somatic variant NS NS Stage:I TEKT4 ENST00000295201 31012 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198707 c.514C>T p.R172W Substitution - Missense unk 2:95539280-95539280 + Confirmed somatic variant NS NS Stage:I TEP1 ENST00000262715 11726 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182602 c.2740C>T p.R914W Substitution - Missense unk 14:20854727-20854727 - Confirmed somatic variant NS NS Stage:I TEX14 SU_SgK307 11737 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191624 c.3608A>G p.E1203G Substitution - Missense unk 17:56649391-56649391 - Confirmed somatic variant NS NS Stage:I TEX14_ENST00000240361 ENST00000240361 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191625 c.3746A>G p.E1249G Substitution - Missense unk 17:56649391-56649391 - Confirmed somatic variant NS NS Stage:I TEX15 ENST00000256246 11738 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185156 c.5582T>C p.M1861T Substitution - Missense unk 8:30700952-30700952 - Confirmed somatic variant NS NS Stage:I TFAP2A ENST00000379608 11742 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180649 c.907G>A p.E303K Substitution - Missense unk 6:10400781-10400781 - Confirmed somatic variant NS NS Stage:I TFAP2A_ENST00000379604 ENST00000379604 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180650 c.925G>A p.E309K Substitution - Missense unk 6:10400781-10400781 - Confirmed somatic variant NS NS Stage:I TFPT ENST00000339150 13630 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192998 c.606A>G p.A202A Substitution - coding silent unk 19:54611369-54611369 - Confirmed somatic variant NS NS Stage:I THAP9 ENST00000302236 23192 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197352 c.241delA p.G83fs*26 Deletion - Frameshift unk 4:83826049-83826049 + Confirmed somatic variant NS NS Stage:I THEM4 ENST00000368814 17947 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206079 c.176T>G p.L59R Substitution - Missense unk 1:151867594-151867594 - Confirmed somatic variant NS NS Stage:I THEMIS ENST00000368248 21569 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203529 c.1768G>A p.V590I Substitution - Missense unk 6:128040959-128040959 - Confirmed somatic variant NS NS Stage:I THOC2 OTTHUMT00000058153.1 19073 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202751 c.4201G>C p.E1401Q Substitution - Missense unk 23:122747914-122747914 - Confirmed somatic variant NS NS Stage:I THOC2_ENST00000245838 ENST00000245838 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202752 c.4438G>C p.E1480Q Substitution - Missense unk 23:122747914-122747914 - Confirmed somatic variant NS NS Stage:I TIRAP ENST00000392679 17192 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203225 c.156A>T p.S52S Substitution - coding silent unk 11:126162460-126162460 + Confirmed somatic variant NS NS Stage:I TIRAP ENST00000392679 17192 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203226 c.241C>T p.R81C Substitution - Missense unk 11:126162545-126162545 + Confirmed somatic variant NS NS Stage:I TLK1_ENST00000431350 ENST00000431350 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208061 c.88G>A p.A30T Substitution - Missense unk 2:172016851-172016851 - Confirmed somatic variant NS NS Stage:I TLR9 ENST00000360658 15633 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191225 c.2673T>C p.L891L Substitution - coding silent unk 3:52255659-52255659 - Confirmed somatic variant NS NS Stage:I TM4SF5 ENST00000270560 11857 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178969 c.201C>T p.A67A Substitution - coding silent unk 17:4684107-4684107 + Confirmed somatic variant NS NS Stage:I TMC5 ENST00000219821 22999 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182458 c.1064G>A p.R355H Substitution - Missense unk 16:19483429-19483429 + Confirmed somatic variant NS NS Stage:I TMC5_ENST00000396229 ENST00000396229 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182459 c.1802G>A p.R601H Substitution - Missense unk 16:19483429-19483429 + Confirmed somatic variant NS NS Stage:I TMCO3 ENST00000279934 20329 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201471 c.1254C>T p.L418L Substitution - coding silent unk 13:114174959-114174959 + Confirmed somatic variant NS NS Stage:I TMEM101 ENST00000206380 28653 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187562 c.684G>A p.T228T Substitution - coding silent unk 17:42089386-42089386 - Confirmed somatic variant NS NS Stage:I TMEM2 ENST00000377066 11869 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195908 c.1305C>T p.V435V Substitution - coding silent unk 9:74349810-74349810 - Confirmed somatic variant NS NS Stage:I TMEM8C ENST00000339996 33778 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204550 c.259G>A p.D87N Substitution - Missense unk 9:136384136-136384136 - Confirmed somatic variant NS NS Stage:I TNC ENST00000350763 5318 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 201985 c.2700A>G p.R900R Substitution - coding silent unk 9:117838829-117838829 - Confirmed somatic variant NS NS Stage:I TNN ENST00000239462 22942 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208121 c.1923C>A p.D641E Substitution - Missense unk 1:175067535-175067535 + Confirmed somatic variant NS NS Stage:I TNXB_ENST00000375247 ENST00000375247 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185550 c.9677C>T p.P3226L Substitution - Missense unk 6:32017322-32017322 - Confirmed somatic variant NS NS Stage:I TOR1A ENST00000351698 3098 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204065 c.991G>A p.D331N Substitution - Missense unk 9:132576259-132576259 - Confirmed somatic variant NS NS Stage:I TPH2 ENST00000333850 20692 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195276 c.907C>T p.R303W Substitution - Missense unk 12:72372833-72372833 + Confirmed somatic variant NS NS Stage:I TPO NM_000547.3 12015 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178199 c.2523C>T p.S841S Substitution - coding silent unk 2:1520659-1520659 + Confirmed somatic variant NS NS Stage:I TPPP2 ENST00000321760 19293 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182757 c.255G>C p.K85N Substitution - Missense unk 14:21499252-21499252 + Confirmed somatic variant NS NS Stage:I TRAF3 NM_003300.2 12033 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200020 c.1383C>T p.N461N Substitution - coding silent unk 14:103371797-103371797 + Confirmed somatic variant NS NS Stage:I TRANK1 ENST00000428977 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186755 c.6982G>A p.A2328T Substitution - Missense unk 3:36871100-36871100 - Confirmed somatic variant NS NS Stage:I TRANK1_ENST00000429976 ENST00000429976 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186756 c.8632G>A p.A2878T Substitution - Missense unk 3:36871100-36871100 - Confirmed somatic variant NS NS Stage:I TREH ENST00000264029 12266 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202142 c.374G>A p.R125H Substitution - Missense unk 11:118533639-118533639 - Confirmed somatic variant NS NS Stage:I TRIM14 NM_014788.2 16283 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199457 c.775C>T p.R259* Substitution - Nonsense unk 9:100854209-100854209 - Confirmed somatic variant NS NS Stage:I TRIM15 ENST00000376694 16284 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184974 c.1026G>A p.P342P Substitution - coding silent unk 6:30139754-30139754 + Confirmed somatic variant NS NS Stage:I TRIM39_ENST00000376656 ENST00000376656 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185008 c.304C>T p.R102W Substitution - Missense unk 6:30297398-30297398 + Confirmed somatic variant NS NS Stage:I TRIM40_ENST00000307859 ENST00000307859 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184972 c.649G>A p.G217R Substitution - Missense unk 6:30115548-30115548 + Confirmed somatic variant NS NS Stage:I TRIM58 ENST00000366481 24150 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210698 c.1154G>T p.W385L Substitution - Missense unk 1:248039484-248039484 + Confirmed somatic variant NS NS Stage:I TRIM62 NM_018207.1 25574 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185911 c.919C>T p.R307C Substitution - Missense unk 1:33613287-33613287 - Confirmed somatic variant NS NS Stage:I TRIP12 ENST00000283943 12306 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210335 c.1115G>A p.R372Q Substitution - Missense unk 2:230701593-230701593 - Confirmed somatic variant NS NS Stage:I TRO_ENST00000173898 ENST00000173898 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191900 c.3217G>A p.V1073I Substitution - Missense unk 23:54956374-54956374 + Confirmed somatic variant NS NS Stage:I TRPC1 ENST00000392969 12333 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205556 c.238G>A p.V80I Substitution - Missense unk 3:142455286-142455286 + Confirmed somatic variant NS NS Stage:I TRPC4 ENST00000379705 12336 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 186854 c.2391delT p.F797fs*3 Deletion - Frameshift unk 13:38211583-38211583 - Confirmed somatic variant NS NS Stage:I TRPM1 ENST00000397795 7146 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184733 c.3756A>G p.E1252E Substitution - coding silent unk 15:31295081-31295081 - Confirmed somatic variant NS NS Stage:I TRPM2 ENST00000397928 12339 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189089 c.4007G>A p.R1336H Substitution - Missense unk 21:45855046-45855046 + Confirmed somatic variant NS NS Stage:I TSHZ1 ENST00000397892 10669 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195398 c.2642G>T p.R881M Substitution - Missense unk 18:73000139-73000139 + Confirmed somatic variant NS NS Stage:I TSSK4 SU_TSSK4 19825 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183517 c.244C>T p.H82Y Substitution - Missense unk 14:24675733-24675733 + Confirmed somatic variant NS NS Stage:I TTC15 ENST00000382110 24284 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178690 c.88C>T p.L30F Substitution - Missense unk 2:3391482-3391482 + Confirmed somatic variant NS NS Stage:I TTC21B ENST00000243344 25660 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207674 c.1083A>G p.L361L Substitution - coding silent unk 2:166786686-166786686 - Confirmed somatic variant NS NS Stage:I TTC7B ENST00000328459 19858 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 198142 c.1395G>A p.T465T Substitution - coding silent unk 14:91121401-91121401 - Confirmed somatic variant NS NS Stage:I TTLL2 ENST00000239587 21211 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207752 c.608G>A p.G203D Substitution - Missense unk 6:167753996-167753996 + Confirmed somatic variant NS NS Stage:I TTN NM_003319 12403 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208431 c.70844C>T p.A23615V Substitution - Missense unk 2:179404854-179404854 - Confirmed somatic variant NS NS Stage:I TTN NM_003319 12403 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208449 c.66744C>T p.T22248T Substitution - coding silent unk 2:179412414-179412414 - Confirmed somatic variant NS NS Stage:I TTN NM_003319 12403 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208573 c.21785G>A p.G7262D Substitution - Missense unk 2:179479261-179479261 - Confirmed somatic variant NS NS Stage:I TTN NM_003319 12403 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208579 c.17107A>C p.R5703R Substitution - coding silent unk 2:179494150-179494150 - Confirmed somatic variant NS NS Stage:I TTN NM_003319 12403 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208582 c.15906T>C p.I5302I Substitution - coding silent unk 2:179497757-179497757 - Confirmed somatic variant NS NS Stage:I TTN_ENST00000342175 ENST00000342175 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208432 c.71420C>T p.A23807V Substitution - Missense unk 2:179404854-179404854 - Confirmed somatic variant NS NS Stage:I TTN_ENST00000342175 ENST00000342175 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208450 c.67320C>T p.T22440T Substitution - coding silent unk 2:179412414-179412414 - Confirmed somatic variant NS NS Stage:I TTN_ENST00000342175 ENST00000342175 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208574 c.22361G>A p.G7454D Substitution - Missense unk 2:179479261-179479261 - Confirmed somatic variant NS NS Stage:I TTN_ENST00000342175 ENST00000342175 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208580 c.17683A>C p.R5895R Substitution - coding silent unk 2:179494150-179494150 - Confirmed somatic variant NS NS Stage:I TTN_ENST00000342175 ENST00000342175 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208583 c.16482T>C p.I5494I Substitution - coding silent unk 2:179497757-179497757 - Confirmed somatic variant NS NS Stage:I TTN_ENST00000356127 ENST00000356127 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208430 c.90329C>T p.A30110V Substitution - Missense unk 2:179404854-179404854 - Confirmed somatic variant NS NS Stage:I TTN_ENST00000356127 ENST00000356127 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208448 c.86229C>T p.T28743T Substitution - coding silent unk 2:179412414-179412414 - Confirmed somatic variant NS NS Stage:I TTN_ENST00000356127 ENST00000356127 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208572 c.41276G>A p.G13759D Substitution - Missense unk 2:179479261-179479261 - Confirmed somatic variant NS NS Stage:I TTN_ENST00000356127 ENST00000356127 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208578 c.36598A>C p.R12200R Substitution - coding silent unk 2:179494150-179494150 - Confirmed somatic variant NS NS Stage:I TTN_ENST00000356127 ENST00000356127 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208581 c.35397T>C p.I11799I Substitution - coding silent unk 2:179497757-179497757 - Confirmed somatic variant NS NS Stage:I TTN_ENST00000360870 ENST00000360870 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208633 c.10405C>T p.R3469C Substitution - Missense unk 2:179616722-179616722 - Confirmed somatic variant NS NS Stage:I TTPAL ENST00000262605 16114 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188410 c.219C>T p.S73S Substitution - coding silent unk 20:43108858-43108858 + Confirmed somatic variant NS NS Stage:I TXNRD3NB ENST00000383572 33870 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203495 c.68A>C p.E23A Substitution - Missense unk 3:126291319-126291319 - Confirmed somatic variant NS NS Stage:I UBAC2 NM_177967.2 20486 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199213 c.757G>A p.V253I Substitution - Missense unk 13:100020095-100020095 + Confirmed somatic variant NS NS Stage:I UBOX5 NM_014948.2 17777 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178556 c.865C>T p.L289L Substitution - coding silent unk 20:3102420-3102420 - Confirmed somatic variant NS NS Stage:I UBTD2 ENST00000393792 24463 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208051 c.374C>T p.P125L Substitution - Missense unk 5:171639165-171639165 - Confirmed somatic variant NS NS Stage:I UGGT1 ENST00000259253 15663 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203632 c.3894A>G p.T1298T Substitution - coding silent unk 2:128937438-128937438 + Confirmed somatic variant NS NS Stage:I UGT2B11 ENST00000305206 12545 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195115 c.753A>G p.G251G Substitution - coding silent unk 4:70078408-70078408 - Confirmed somatic variant NS NS Stage:I UNC13A_ENST00000519716 ENST00000519716 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 182056 c.1710C>T p.C570C Substitution - coding silent unk 19:17759346-17759346 - Confirmed somatic variant NS NS Stage:I UNC13D ENST00000207549 23147 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195474 c.857G>A p.R286Q Substitution - Missense unk 17:73836307-73836307 - Confirmed somatic variant NS NS Stage:I UNC93A ENST00000230256 12570 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207746 c.1074C>T p.G358G Substitution - coding silent unk 6:167721364-167721364 + Confirmed somatic variant NS NS Stage:I UNQ1887 ENST00000353487 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202393 c.727C>T p.R243C Substitution - Missense unk 12:121206174-121206174 - Confirmed somatic variant NS NS Stage:I USH2A ENST00000307340 12601 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 209904 c.7168G>A p.G2390R Substitution - Missense unk 1:216108090-216108090 - Confirmed somatic variant NS NS Stage:I USH2A ENST00000307340 12601 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 78754 c.296C>T p.A99V Substitution - Missense unk 1:214662006-214662006 - 1:216595383-216595383 - Confirmed somatic variant NS NS Stage:I USP10 NM_005153.1 12608 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197289 c.2270T>A p.I757N Substitution - Missense unk 16:84812561-84812561 + Confirmed somatic variant NS NS Stage:I USP16 NM_006447.2 12614 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184803 c.2122C>T p.R708C Substitution - Missense unk 21:30422428-30422428 + Confirmed somatic variant NS NS Stage:I USP26 NM_031907.1 13485 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204160 c.2196C>T p.F732F Substitution - coding silent unk 23:132160053-132160053 - Confirmed somatic variant NS NS Stage:I USP42 XM_374396.2 20068 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179398 c.4121A>G p.Q1374R Substitution - Missense unk 7:6196564-6196564 + Confirmed somatic variant NS NS Stage:I UTRN ENST00000367545 12635 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205625 c.200T>C p.L67S Substitution - Missense unk 6:144743072-144743072 + Confirmed somatic variant NS NS Stage:I VAX1 ENST00000277905 12660 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 202280 c.147C>T p.G49G Substitution - coding silent unk 10:118897421-118897421 - Confirmed somatic variant NS NS Stage:I VIPR1 ENST00000325123 12694 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188407 c.213C>A p.T71T Substitution - coding silent unk 3:42560743-42560743 + Confirmed somatic variant NS NS Stage:I VMO1 ENST00000328739 30387 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178972 c.553G>T p.G185C Substitution - Missense unk 17:4688713-4688713 - Confirmed somatic variant NS NS Stage:I VPS13A ENST00000360280 1908 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196850 c.5264G>A p.G1755D Substitution - Missense unk 9:79933458-79933458 + Confirmed somatic variant NS NS Stage:I VPS13A_ENST00000376634 ENST00000376634 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196851 c.5264G>A p.G1755D Substitution - Missense unk 9:79933458-79933458 + Confirmed somatic variant NS NS Stage:I VPS16 ENST00000380445 14584 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178460 c.1735C>T p.L579L Substitution - coding silent unk 20:2845025-2845025 + Confirmed somatic variant NS NS Stage:I VPS4A ENST00000254950 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194650 c.679G>A p.D227N Substitution - Missense unk 16:69354102-69354102 + Confirmed somatic variant NS NS Stage:I VPS52 ENST00000293739 10518 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 185888 c.2092C>T p.R698* Substitution - Nonsense unk 6:33218698-33218698 - Confirmed somatic variant NS NS Stage:I WAS NM_000377.1 12731 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190213 c.416C>T p.A139V Substitution - Missense unk 23:48544178-48544178 + Confirmed somatic variant NS NS Stage:I WDR26 ENST00000295024 21208 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210129 c.761C>T p.A254V Substitution - Missense unk 1:224592229-224592229 - Confirmed somatic variant NS NS Stage:I WDR26_ENST00000414423 ENST00000414423 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210130 c.1202C>T p.A401V Substitution - Missense unk 1:224592229-224592229 - Confirmed somatic variant NS NS Stage:I WDR4 ENST00000398208 12756 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188596 c.186T>A p.G62G Substitution - coding silent unk 21:44293771-44293771 - Confirmed somatic variant NS NS Stage:I WDR74_ENST00000525239 ENST00000525239 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193654 c.351G>A p.K117K Substitution - coding silent unk 11:62603451-62603451 - Confirmed somatic variant NS NS Stage:I WEE1 NM_003390 12761 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180391 c.1551G>A p.P517P Substitution - coding silent unk 11:9608076-9608076 + Confirmed somatic variant NS NS Stage:I WIF1 NM_007191.2 18081 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193970 c.1116A>G p.P372P Substitution - coding silent unk 12:65445153-65445153 - Confirmed somatic variant NS NS Stage:I WWC3 NM_015691.2 29237 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180505 c.2972G>A p.R991H Substitution - Missense unk 23:10106864-10106864 + Confirmed somatic variant NS NS Stage:I XIRP2 ENST00000295237 14303 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 207772 c.5135A>G p.D1712G Substitution - Missense unk 2:168103037-168103037 + Confirmed somatic variant NS NS Stage:I XPNPEP2 NM_003399.3 12823 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 203635 c.293C>T p.S98F Substitution - Missense unk 23:128879237-128879237 + Confirmed somatic variant NS NS Stage:I ZAR1 ENST00000327939 20436 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190131 c.3G>A p.M1I Substitution - Missense unk 4:48492311-48492311 + Confirmed somatic variant NS NS Stage:I ZBTB48 ENST00000319084 4930 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 179507 c.1097G>A p.R366Q Substitution - Missense unk 1:6646807-6646807 + Confirmed somatic variant NS NS Stage:I ZCCHC4 ENST00000302874 22917 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183876 c.1364G>A p.R455H Substitution - Missense unk 4:25366746-25366746 + Confirmed somatic variant NS NS Stage:I ZCWPW2 ENST00000383768 23574 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 184628 c.429C>T p.G143G Substitution - coding silent unk 3:28476697-28476697 + Confirmed somatic variant NS NS Stage:I ZDHHC1 ENST00000348579 17916 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194396 c.916C>T p.R306W Substitution - Missense unk 16:67432126-67432126 - Confirmed somatic variant NS NS Stage:I ZDHHC16 ENST00000393760 20714 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199288 c.291C>T p.I97I Substitution - coding silent unk 10:99211894-99211894 + Confirmed somatic variant NS NS Stage:I ZDHHC5 NM_015457.2 18472 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 192676 c.1373G>T p.S458I Substitution - Missense unk 11:57466281-57466281 + Confirmed somatic variant NS NS Stage:I ZFAND3 ENST00000287218 18019 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187136 c.144C>T p.S48S Substitution - coding silent unk 6:38029400-38029400 + Confirmed somatic variant NS NS Stage:I ZFP112 ENST00000337401 13021 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190601 c.1705C>A p.H569N Substitution - Missense unk 19:44832605-44832605 - Confirmed somatic variant NS NS Stage:I ZIC3 NM_003413.2 12874 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 204659 c.68G>A p.R23H Substitution - Missense unk 23:136648918-136648918 + Confirmed somatic variant NS NS Stage:I ZMAT1 NM_032441.1 29377 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199739 c.16T>C p.C6R Substitution - Missense unk 23:101141680-101141680 - Confirmed somatic variant NS NS Stage:I ZNF217 NM_006526.2 13009 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191083 c.987C>T p.S329S Substitution - coding silent unk 20:52198379-52198379 - Confirmed somatic variant NS NS Stage:I ZNF233 ENST00000391958 30946 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190581 c.199C>T p.R67W Substitution - Missense unk 19:44771075-44771075 + Confirmed somatic variant NS NS Stage:I ZNF238 ENST00000366538 13030 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210652 c.460G>A p.D154N Substitution - Missense unk 1:244217563-244217563 + Confirmed somatic variant NS NS Stage:I ZNF238 ENST00000366538 13030 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 210653 c.1096G>A p.A366T Substitution - Missense unk 1:244218199-244218199 + Confirmed somatic variant NS NS Stage:I ZNF273 ENST00000395375 13067 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 194028 c.161T>C p.L54P Substitution - Missense unk 7:64378017-64378017 + Confirmed somatic variant NS NS Stage:I ZNF275 XM_372267.3 13069 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206415 c.237C>T p.G79G Substitution - coding silent unk 23:152612539-152612539 + Confirmed somatic variant NS NS Stage:I ZNF275 XM_372267.3 13069 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 206416 c.400G>A p.G134R Substitution - Missense unk 23:152612702-152612702 + Confirmed somatic variant NS NS Stage:I ZNF283_ENST00000324461 ENST00000324461_v65 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 190466 c.1767T>C p.H589H Substitution - coding silent unk 19:44352520-44352520 + Confirmed somatic variant NS NS Stage:I ZNF287 ENST00000268727 13502 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181797 c.2128A>G p.T710A Substitution - Missense unk 17:16455307-16455307 - Confirmed somatic variant NS NS Stage:I ZNF292 ENST00000339907 18410 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197802 c.1147G>T p.G383* Substitution - Nonsense unk 6:87964929-87964929 + Confirmed somatic variant NS NS Stage:I ZNF292_ENST00000369577 ENST00000369577 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 197803 c.1582G>T p.G528* Substitution - Nonsense unk 6:87964929-87964929 + Confirmed somatic variant NS NS Stage:I ZNF304 ENST00000282286 13505 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193721 c.1342G>A p.V448M Substitution - Missense unk 19:57868579-57868579 + Confirmed somatic variant NS NS Stage:I ZNF330 ENST00000262990 15462 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205433 c.7delA p.K5fs*18 Deletion - Frameshift unk 4:142143532-142143532 + Confirmed somatic variant NS NS Stage:I ZNF335 ENST00000322927 15807 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 188887 c.749G>A p.C250Y Substitution - Missense unk 20:44596438-44596438 - Confirmed somatic variant NS NS Stage:I ZNF354C ENST00000315475 16736 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 208360 c.294G>T p.Q98H Substitution - Missense unk 5:178505727-178505727 + Confirmed somatic variant NS NS Stage:I ZNF394 ENST00000337673 18832 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 199236 c.582G>A p.P194P Substitution - coding silent unk 7:99096340-99096340 - Confirmed somatic variant NS NS Stage:I ZNF433 ENST00000344980 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 180955 c.381T>C p.T127T Substitution - coding silent unk 19:12127301-12127301 - Confirmed somatic variant NS NS Stage:I ZNF443 ENST00000301547 20878 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181031 c.1375C>T p.R459C Substitution - Missense unk 19:12541611-12541611 - Confirmed somatic variant NS NS Stage:I ZNF462 ENST00000277225 21684 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 200816 c.5539C>T p.R1847C Substitution - Missense unk 9:109691732-109691732 + Confirmed somatic variant NS NS Stage:I ZNF516 ENST00000217537 28990 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195647 c.2944C>T p.P982S Substitution - Missense unk 18:74091126-74091126 - Confirmed somatic variant NS NS Stage:I ZNF516 ENST00000217537 28990 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 195664 c.1620G>A p.A540A Substitution - coding silent unk 18:74153391-74153391 - Confirmed somatic variant NS NS Stage:I ZNF532 ENST00000336078 30940 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 191833 c.1437G>A p.T479T Substitution - coding silent unk 18:56586956-56586956 + Confirmed somatic variant NS NS Stage:I ZNF57 ENST00000306908 13125 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178501 c.917A>C p.K306T Substitution - Missense unk 19:2917536-2917536 + Confirmed somatic variant NS NS Stage:I ZNF619 ENST00000314686 26910 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 187860 c.1611delT p.Q540fs*>21 Deletion - Frameshift unk 3:40529660-40529660 + Confirmed somatic variant NS NS Stage:I ZNF624 ENST00000311331 29254 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181828 c.982G>T p.G328* Substitution - Nonsense unk 17:16527218-16527218 - Confirmed somatic variant NS NS Stage:I ZNF786 ENST00000316286 21806 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 205862 c.2203G>A p.D735N Substitution - Missense unk 7:148767658-148767658 - Confirmed somatic variant NS NS Stage:I ZNF791 ENST00000343325 26895 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 181055 c.518A>G p.Q173R Substitution - Missense unk 19:12738861-12738861 + Confirmed somatic variant NS NS Stage:I ZNF835 ENST00000342088 34332 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 193522 c.1661G>A p.R554H Substitution - Missense unk 19:57174972-57174972 - Confirmed somatic variant NS NS Stage:I ZNF98_ENST00000357774 ENST00000357774_v62 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 183166 c.1568G>A p.C523Y Substitution - Missense unk 19:22574469-22574469 - Confirmed somatic variant NS NS Stage:I ZNFX1 ENST00000371752 29271 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 189892 c.5711C>T p.T1904M Substitution - Missense unk 20:47863850-47863850 - Confirmed somatic variant NS NS Stage:I ZP3 ENST00000336517 13189 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 196328 c.543C>T p.T181T Substitution - coding silent unk 7:76062947-76062947 + Confirmed somatic variant NS NS Stage:I ZZEF1 ENST00000381638 29027 TCGA-AA-3877 1651067 1565854 large_intestine colon carcinoma adenocarcinoma y 178829 c.8401C>T p.R2801W Substitution - Missense unk 17:3917396-3917396 - Confirmed somatic variant NS NS Stage:I