#!/bin/sh 
#
# Run this script from the directory containing the jar files.
#
CLASSPATH=Jemboss.jar:JembossAlignment.jar:axis.jar:jaxrpc.jar:saaj.jar:jakarta-regexp-1.2.jar:jalview.jar:jnet.jar:jcert.jar:jsse.jar:xerces.jar:commons-logging.jar:commons-discovery.jar:grout.jar

java -classpath $CLASSPATH org.emboss.jemboss.Jemboss &