From bronze!sol.ctr.columbia.edu!spool.mu.edu!sdd.hp.com!mips!apple!rutgers!bionet!kristoff Wed Sep 11 12:07:13 EST 1991 Article: 347 of bionet.molbio.genbank Path: bronze!sol.ctr.columbia.edu!spool.mu.edu!sdd.hp.com!mips!apple!rutgers!bionet!kristoff From: kristoff@genbank.bio.net (David Kristofferson) Newsgroups: bionet.molbio.genbank Subject: Re: (none) Message-ID: Date: 11 Sep 91 15:45:06 GMT Article-I.D.: genbank.Sep.11.08.45.06.1991.9651 References: <9109110342.AA06133@genbank.bio.net> Distribution: bionet Organization: GenBank Online Service Lines: 781 > get pub/GB_software_clearinghouse.txt This information is currently only available for anonymous FTP from genbank.bio.net, but the file is small enough that I'll post it here to the newsgroup. Sincerely, Dave Kristofferson GenBank Manager kristoff@genbank.bio.net ---------------------------------------------------------------------- The GenBank Software Clearinghouse is a database of software that uses the GenBank database. If you know of software that is missing from the following list, please fill out the form in the anonymous ftp directory (in pub/doc/clearinghouse.form) and mail it to genbank@genbank.bio.net). ---------------------------------------------------------------------- PROGRAM . DESCRIPTION . COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS SUPPLIER University UMCS STREET Akademicka 19 St. LOCATION Lublin PL 20-033 COUNTRY POLAND TELEPHONE . EMAIL MICROB@PLUMCS11.BITNET FAX . CONTACT Marek Tchorzewski TITLE . DEPARTMENT Dept. of Molecular Biology DATABASES GenBank (floppy) EMBL PIR SWISS-PROT PDB (Brookhaven) // PROGRAM ARIADNE DESCRIPTION Complex Pattern Identification Tool COMPUTER/OS VAX, Unix Sun-3 and Sun-4, Unix Any Common Lisp System SUPPLIER DNASTAR, Inc. STREET 1228 S. Park St. LOCATION Madison WI 53705 COUNTRY USA TELEPHONE 608-258-7439 EMAIL . FAX 608-258-7420 CONTACT Philip E. Doggett TITLE Senior Programmer DEPARTMENT . DATABASES GenBank PIR Translated GenBank // PROGRAM AUTOREADER DESCRIPTION . COMPUTER/OS IBM PC or clone, Unix SUPPLIER Bio-Rad Laboratories STREET 3300 Regatta Blvd. LOCATION Richmond CA 94804 COUNTRY USA TELEPHONE 800-424-6723 EMAIL . FAX . CONTACT . . TITLE . DEPARTMENT . DATABASES . // PROGRAM BIGPROBE DESCRIPTION . COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS IBM PS/2, MS-DOS/PC-DOS Sun-3, Unix SUPPLIER University of Arizona STREET Biosciences West 230 LOCATION Tucson AZ 85721 COUNTRY USA TELEPHONE 602-621-7560 EMAIL kmwillia@arizrvax (bitnet) FAX . CONTACT . . TITLE . DEPARTMENT Genetics Software Center, Molecular & Cellular Biology DATABASES . // PROGRAM CD-GENE DESCRIPTION . COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS IBM PS/2, MS-DOS/PC-DOS SUPPLIER Hitachi America, Ltd. STREET 2000 Sierra Point Parkway LOCATION Brisbane CA 94005 COUNTRY USA TELEPHONE 415-589-8300 EMAIL . FAX 415-583-4207 CONTACT Kathy Padgett TITLE . DEPARTMENT Computer Software Dept. DATABASES GenBank EMBL PIR // PROGRAM Delila System DESCRIPTION . COMPUTER/OS Pascal Compiler MAchine, C SUPPLIER National Cancer Inst. STREET FCRDC Bldg. 469 Rm. 144 P.O. Box B LOCATION Frederick MD 21702-1201 COUNTRY USA TELEPHONE 301-846-5581 EMAIL toms@ncifcrf.gov FAX 301-846-5598 CONTACT Tom Schneider TITLE . DEPARTMENT Lab. of Mathematical Biology DATABASES GenBank // PROGRAM DM5 DESCRIPTION Sequence Analysis Software COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS IBM PS/2, MS-DOS/PC-DOS Sun-3, Unix SUPPLIER University of Arizona STREET Biosciences West 230 LOCATION Tucson AZ 85721 COUNTRY USA TELEPHONE 602-621-7560 EMAIL kmwillia@arizrvax (bitnet) FAX . CONTACT . . TITLE . DEPARTMENT Genetics Software Center, Molecular & Cellular Biology DATABASES GenBank // PROGRAM DNA DESCRIPTION . COMPUTER/OS Hewlett-Packard 80 series SUPPLIER University of Cape Town Medical School STREET Observatory St. LOCATION Cape Town . 7925 COUNTRY South Africa TELEPHONE 021-471250 EMAIL . FAX 021-478955 CONTACT E.H. Harley TITLE . DEPARTMENT Dept. of Chemical Pathology DATABASES . // PROGRAM DNA Inspector IIe DESCRIPTION . COMPUTER/OS Macintosh SUPPLIER Textco STREET 27 Gilson Rd. LOCATION West Lebanon NH 03784 COUNTRY USA TELEPHONE 603-643-1471 EMAIL bob.gross@dartmouth.edu FAX . CONTACT . . TITLE . DEPARTMENT . DATABASES GenBank EMBL SWISS-PROT // PROGRAM DNAMAT DESCRIPTION . COMPUTER/OS IBM Mainframe, VM/CMS SUPPLIER Weizman Institute of Science STREET . LOCATION Rehovot . 76100 COUNTRY Israel TELEPHONE 972-8-483251 EMAIL mcunger@weizman (bitnet) FAX 972-8-466966 CONTACT Ron Unger TITLE . DEPARTMENT Computer Science DATABASES GenBank EMBL // PROGRAM DNASIS DESCRIPTION . COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS IBM PS/2, MS-DOS/PC-DOS SUPPLIER Hitachi America, Ltd. STREET 2000 Sierra Point Parkway LOCATION Brisbane CA 94005 COUNTRY USA TELEPHONE 415-589-8300 EMAIL . FAX 415-583-4207 CONTACT Kathy Padgett TITLE . DEPARTMENT Computer Software Dept. DATABASES GenBank EMBL PIR // PROGRAM DNATOOLS DESCRIPTION . COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS IBM PS/2, MS-DOS/PC-DOS SUPPLIER Vitasoft Associates STREET P.O. Box 1908 LOCATION Orinda CA 94563 COUNTRY USA TELEPHONE 415-253-1777 EMAIL . FAX . CONTACT . . TITLE . DEPARTMENT Sales Dept. DATABASES GenBank EMBL PIR SWISS-PROT // PROGRAM Eugene (TM) and SAM (TM) DESCRIPTION . COMPUTER/OS Sun-3, Unix Sun-4, Unix DEC 3100, Unix SUPPLIER Lark Sequencing Tech., Ltd. STREET 1709 Dryden, Suite 604 LOCATION Houston TX 77030-2401 COUNTRY USA TELEPHONE 800-288-3720 EMAIL . FAX 713-799-9030 CONTACT . . TITLE . DEPARTMENT . DATABASES GenBank PIR // PROGRAM FASTA DESCRIPTION Rapid Sequence Comparison COMPUTER/OS all SUPPLIER U. of Virginia STREET Box 440 Jordan Hall LOCATION Charlottesville VA 22908 COUNTRY USA TELEPHONE 804-924-2818 EMAIL wrp@virginia.edu FAX 804-924-5069 CONTACT William R. Pearson TITLE . DEPARTMENT Dept. of Biochemistry DATABASES GenBank EMBL PIR SWISS-PROT // PROGRAM FSAP DESCRIPTION . COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS IBM PS/2, MS-DOS/PC-DOS Sun 3 and Sun 4, Unix; Apple II, Pascal SUPPLIER University of Manitoba STREET . LOCATION Winnipeg MN R3T 4X6 COUNTRY CANADA TELEPHONE 204-474-6085 EMAIL frist@ccu.umanitoba.ca FAX 204-275-5128 CONTACT Brian Fristensky TITLE . DEPARTMENT Dept. of Plant Science DATABASES GenBank (tape) // PROGRAM GENAS DESCRIPTION . COMPUTER/OS Fujitsu M780 Mainframe, OSTV/F4 SUPPLIER Kyushu University STREET 46-02 LOCATION Fukuoka . 812 COUNTRY Japan TELEPHONE 092-641-1101 (x6201) EMAIL a70154a@jpnccku.bitnet FAX 092-641-2928 CONTACT S. Kuhara TITLE . DEPARTMENT Dept. of Agricultural Chemistry DATABASES GenBank EMBL PIR // PROGRAM GENEPRO DESCRIPTION DNA Gel Reader and Other COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS IBM PS/2, MS-DOS/PC-DOS SUPPLIER Riverside Scientific Enterprises STREET 18332 57th Ave., N.E. LOCATION Seattle WA 98155 COUNTRY USA TELEPHONE 206-486-4022 EMAIL . FAX 206-367-7811 CONTACT . . TITLE . DEPARTMENT . DATABASES GenBank EMBL PIR // PROGRAM GENEius DESCRIPTION Sequence Analysis Software COMPUTER/OS Apple II, GS/Pro-DOS Macintosh SUPPLIER BioTechnology Software Specialities STREET P.O. Box 1521 LOCATION Corvallis OR 97339 COUNTRY USA TELEPHONE 503-758-8086 EMAIL . FAX . CONTACT . . TITLE . DEPARTMENT . DATABASES GenBank // PROGRAM GelRead DESCRIPTION . COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS IBM PS/2, MS-DOS/PC-DOS SUPPLIER Bio-Rad Laboratories STREET 3300 Regatta Blvd. LOCATION Richmond CA 94804 COUNTRY USA TELEPHONE 800-424-6723 EMAIL . FAX . CONTACT . . TITLE . DEPARTMENT . DATABASES . // PROGRAM Gene Construction Kit DESCRIPTION . COMPUTER/OS Macintosh SUPPLIER Textco STREET 27 Gilson Rd. LOCATION West Lebanon NH 03784 COUNTRY USA TELEPHONE 603-643-1471 EMAIL bob.gross@dartmouth.edu FAX . CONTACT . . TITLE . DEPARTMENT . DATABASES GenBank EMBL SWISS-PROT // PROGRAM GeneWorks DESCRIPTION Nucleic acid and protein analyses of all types COMPUTER/OS Macintosh SUPPLIER IntelliGenetics Inc. STREET 700 E. El Camino Real LOCATION Mountain View CA 94040 COUNTRY USA TELEPHONE 415-962-7300 EMAIL . FAX 415-962-7302 CONTACT Dave Callender TITLE Director of Sales and Customer Service DEPARTMENT . DATABASES EMBL SWISS-PROT GENBANK // PROGRAM IBI Pustell Sequence Analysis Software DESCRIPTION Nucleic Acid and Protein Sequence Analyses COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS IBM PS/2, MS-DOS/PC-DOS SUPPLIER International Biotechnologies, Inc. STREET P.O. Box 9558 LOCATION New Haven CT 06535 COUNTRY USA TELEPHONE 203-786-5600 EMAIL . FAX 203-624-3143 CONTACT . . TITLE . DEPARTMENT . DATABASES GenBank PIR // PROGRAM IG Suite DESCRIPTION Nucleic acid and protein analyses of all types COMPUTER/OS Sun-3 and Sun-4, Unix SPARC Stations VAX, VMS SUPPLIER IntelliGenetics Inc. STREET 700 E. El Camino Real LOCATION Mountain View CA 94040 COUNTRY USA TELEPHONE 415-962-7300 EMAIL . FAX 415-962-7302 CONTACT Dave Callender TITLE Director of Sales and Customer Service DEPARTMENT . DATABASES GenBank EMBL PIR SWISS-PROT KeyBank, VectorBank // PROGRAM LaserGene and DNASTAR DESCRIPTION Nucleic acid and protein analyses of all types COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS IBM PS/2, MS-DOS/PC-DOS SUPPLIER DNASTAR, Inc. STREET 1228 S. Park St. LOCATION Madison WI 53705 COUNTRY USA (call for European address and telephone) TELEPHONE 608-258-7439 EMAIL . FAX 608-258-7420 CONTACT Philip E. Doggett TITLE Senior Programmer DEPARTMENT . DATABASES GenBank PIR Brookhaven Berlin RNA AIDS (HIV) Vectors // PROGRAM MALI and PRALI DESCRIPTION Multiple Alignment of Proteins COMPUTER/OS Sun-3, Unix Sun-4, Unix VAX, Unix SUPPLIER EMBL STREET Postfach 10.2209, Meyerhofstrasse 1 LOCATION Heidelberg . D-6900 COUNTRY West Germany TELEPHONE 0049-6221-387275 EMAIL vingron@embl.bitnet FAX 0049-6221-387306 CONTACT Martin Vingron TITLE . DEPARTMENT Biocomputing Programme DATABASES . // PROGRAM MASTERSCAN DESCRIPTION Image Processing COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS SUPPLIER CSPI STREET 40 Linnell Cir. LOCATION Billerica MA 01821 COUNTRY USA TELEPHONE 617-272-6020 EMAIL . FAX 508-663-0150 CONTACT . . TITLE . DEPARTMENT Scananalytics Dept. DATABASES . // PROGRAM MacVector DESCRIPTION . COMPUTER/OS Macintosh SUPPLIER International Biotechnologies, Inc. STREET P.O. Box 9558 LOCATION New Haven CT 06535 COUNTRY USA TELEPHONE 203-786-5600 EMAIL . FAX 203-624-3143 CONTACT . . TITLE . DEPARTMENT . DATABASES GenBank PIR // PROGRAM NBRF-PIR DESCRIPTION Sequence Analysis Software COMPUTER/OS VAX, VMS SUPPLIER National Biomedical Research Foundation STREET 3900 Reservoir Rd., NW LOCATION Washington DC 2007-2195 COUNTRY USA TELEPHONE 202-687-2121 EMAIL pirmail@gunbrf.bitnet FAX 202-687-1662 CONTACT Kathryn Sidman TITLE . DEPARTMENT Protein Identification Resource DATABASES PIR // PROGRAM NIH Prophet System DESCRIPTION . COMPUTER/OS Sun-3 and Sun-4, Unix VAX, VMS RISC DECStations, Ultrix SUPPLIER BBN Systems & Technologies Corp. STREET 10 Moulton St. LOCATION Cambridge MA 02138 COUNTRY USA TELEPHONE 617-873-2669 EMAIL prophet-help@bbn.com FAX 617-873-3776 CONTACT . Prophet TITLE . DEPARTMENT Intelligent Systems, R&D Dept. DATABASES GenBank PIR Brookhaven Cambridge Crystallographic Database // PROGRAM PC/GENE DESCRIPTION Nucleic acid and protein analyses of all types COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS IBM PS/2, MS-DOS/PC-DOS SUPPLIER IntelliGenetics Inc. STREET 700 E. El Camino Real LOCATION Mountain View CA 94040 COUNTRY USA TELEPHONE 415-962-7300 EMAIL . FAX 415-962-7302 CONTACT Dave Callender TITLE Director of Sales and Customer Service DEPARTMENT . DATABASES EMBL SWISS-PROT GENBANK // PROGRAM PROSIS DESCRIPTION . COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS IBM PS/2, MS-DOS/PC-DOS SUPPLIER Hitachi America, Ltd. STREET 2000 Sierra Point Parkway LOCATION Brisbane CA 94005 COUNTRY USA TELEPHONE 415-589-8300 EMAIL . FAX 415-583-4207 CONTACT Kathy Padgett TITLE . DEPARTMENT Computer Software Dept. DATABASES GenBank EMBL PIR // PROGRAM PSQ DESCRIPTION Protein Sequence Database Retrieval System COMPUTER/OS VAX, VMS SUPPLIER National Biomedical Research Foundation STREET 3900 Reservoir Rd., NW LOCATION Washington DC 20007-2195 COUNTRY USA TELEPHONE 202-687-2121 EMAIL pirmail@gunbrf.bitnet FAX 202-687-1662 CONTACT Kathryn Sidman TITLE . DEPARTMENT Protein Identification Resource DATABASES PIR // PROGRAM Procedural Interface DESCRIPTION Fragment Assembly System COMPUTER/OS VAX, Unix Sun-4, Unix Sun-3, Unix SUPPLIER University of Arizona STREET 713 Gould-Simpson Bldg. LOCATION Tucson AZ 85721 COUNTRY USA TELEPHONE 602-621-6613 EMAIL gene@arizona.edu FAX 602-621-4246 CONTACT E. Myers TITLE . DEPARTMENT Dept. of Computer Science DATABASES . // PROGRAM Prostruc DESCRIPTION Secondary Structure Predictions COMPUTER/OS Computers running Fortran 77 SUPPLIER Dana-Farber Cancer Institute STREET 44 Binney St. LOCATION Boston MA 02115 COUNTRY USA TELEPHONE 617-732-3746 EMAIL tsmith@mbcrr.harvard.edu FAX 617-735-8653 CONTACT . . TITLE . DEPARTMENT Molecular Biology Computer Research Resource DATABASES GenBank EMBL PIR SWISS-PROT Brookhaven // PROGRAM REPLICA DESCRIPTION . COMPUTER/OS VAX, VMS SUPPLIER Harvard Medical School STREET 25 Shattuck St. LOCATION Boston MA 02115 COUNTRY USA TELEPHONE 617-732-7562 EMAIL church%gnome.decnet@mghccc.harvard.edu FAX 617-732-7663 CONTACT . . TITLE . DEPARTMENT Genetics Dept. DATABASES . // PROGRAM RZmap DESCRIPTION Restriction Maps from Double Digest Fragment Lengths COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS SUPPLIER Dana-Farber Cancer Institute STREET 44 Binney St. LOCATION Boston MA 02115 COUNTRY USA TELEPHONE 617-732-3746 EMAIL russo@mbcrr.harvard.edu FAX 617-735-8653 CONTACT Susan Russo TITLE . DEPARTMENT Molecular Biology Computer Research Resource - LG-2 DATABASES . // PROGRAM Recombinant Toolkit 4.0 DESCRIPTION Nucleic acid and protein sequewnce analysis COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS SUPPLIER SOFTSHU STREET 2250 Webster LOCATION Palo Alto CA 94301 COUNTRY USA TELEPHONE 415-321-7319 EMAIL . FAX . CONTACT Dr. Stefan Unger TITLE . DEPARTMENT . DATABASES GenBank // PROGRAM SCRUTINEER DESCRIPTION Searching and Describing Protein Databases COMPUTER/OS VAX, VMS PASCAL SUPPLIER EMBL STREET Postfach 10.2209, Meyerhofstrasse 1 LOCATION Heidelberg . D-6900 COUNTRY West Germany TELEPHONE 0049-6221-387451 EMAIL sibbald@embl.bitnet FAX 0049-6221-387306 CONTACT Peter Sibbald TITLE . DEPARTMENT Biocomputing Programme DATABASES SEQDB PIR EMBL SWISS-PROT // PROGRAM SEQAID II DESCRIPTION . COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS SUPPLIER Kansas State University STREET Ackert Hall LOCATION Manhattan KS 66506 COUNTRY USA TELEPHONE 913-532-6641 EMAIL droufa@ksuvm.ksu.edu FAX 913-532-6653 CONTACT Donald J. Roufa TITLE Prof. of Biology DEPARTMENT Div. of Biology DATABASES GenBank // PROGRAM STATSEARCH DESCRIPTION . COMPUTER/OS Sun-3, Unix Sun-4, Unix VAX, VMS SUPPLIER National Institutes for Medical Research STREET The Ridgeway, Mill Hill LOCATION London . NW7 1AA COUNTRY United Kingdom TELEPHONE 01-959-3666 (x2299) EMAIL r-mott@uk.ac.mrd.nimr FAX 01-906-4477 CONTACT . . TITLE . DEPARTMENT Medical Research Council DATABASES GenBank EMBL PIR SWISS-PROT // PROGRAM Sensitive Sequence Comparison DESCRIPTION Comparison of Proteins for Distance Relationships COMPUTER/OS VAX, VMS Sun-3, Unix Sun-4, Unix SUPPLIER EMBL STREET Postfach 10.2209, Meyerhofstrasse 1 LOCATION Heidelberg . D-6900 COUNTRY West Germany TELEPHONE 0049-6221-387275 EMAIL argos@embl.bitnet FAX 0049-6221-387306 CONTACT R. Rechid TITLE . DEPARTMENT . DATABASES . // PROGRAM SuperClone DESCRIPTION . COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS IBM PS/2, MS-DOS/PC-DOS SUPPLIER Coral Software STREET 6065 Mission Gorge Rd. LOCATION San Diego CA 92120 COUNTRY USA TELEPHONE 619-582-3065 EMAIL . FAX . CONTACT . . TITLE . DEPARTMENT . DATABASES GenBank EMBL // PROGRAM TDALIGN DESCRIPTION . COMPUTER/OS IBM PC or clone and PS/2, MS-DOS/PC-DOS VAX, VMS Sun-3 and Sun-4, Unix SUPPLIER University of Houston STREET 4800 Calhoun/Science and Research I - Rm 14 LOCATION Houston TX 77204-5500 COUNTRY USA TELEPHONE 713-749-7599 EMAIL davison@uh.edu FAX 713-749-3239 CONTACT Dan Davison TITLE . DEPARTMENT Dept. of Biochemical & Biophysical Sciences DATABASES GenBank // PROGRAM XYLEM DESCRIPTION . COMPUTER/OS IBM PC or clone, MS-DOS/PC-DOS IBM PS/2, MS-DOS/PC-DOS Sun 3 and Sun 4, Unix SUPPLIER University of Manitoba STREET . LOCATION Winnipeg MN R3T 4X6 COUNTRY CANADA TELEPHONE 204-474-6085 EMAIL frist@ccu.umanitoba.ca FAX 204-275-5128 CONTACT Brian Fristensky TITLE . DEPARTMENT Dept. of Plant Science DATABASES GenBank (tape) PIR VecBase LiMB //