Catalogue of Molecular Biology Programs Release 6.1 23 Jul 1999 All thanks are in the file biocatal.thanks. ===================================================================== AC BC00305 NAME EMBL Mail-QUICKSEARCH server DOMAIN e-mail Server RETRIEVAL SERVER quick@embl-heidelberg.de DESCRIPTION Service based on the QUICKSEARCH and QUICKSHOW DESCRIPTION programs developed by J. Devereux as DESCRIPTION implemented in the GCG package.It allows to DESCRIPTION perform very rapid comparisons of a nucleic DESCRIPTION acid sequence against the EMBL and GenBank DESCRIPTION databases. It answers the question: does DESCRIPTION this sequence already occur in the database DESCRIPTION (with a small number of mismatches) ? The DESCRIPTION databases are updated daily. AUTHOR - RT - ADDRESS European Biology Molecular Laboratory (EMBL) ADDRESS Heidelberg / Germany CONTACT nethelp@ebi.ac.uk SITE - SITE-CONTACT nethelp@ebi.ac.uk OS - LANGUAGE - VOLUME - AC BC00331 NAME RETRIEVE DOMAIN e-mail Server RETRIEVAL SERVER retrieve@ncbi.nlm.nih.gov DESCRIPTION Allows to retrieve entries from sequence DESCRIPTION databases using various text search para- DESCRIPTION meters.This server gives you access to DESCRIPTION GenBank,EMBL, SWISS-PROT, PIR, GenPept, Kabat, AUTHOR - RT - ADDRESS National Center for Biotechnology Information ADDRESS National Library of Medicine/NIH/Bethesda/USA CONTACT retrieve-help@ncbi.nlm.nih.gov SITE - SITE-CONTACT - OS - LANGUAGE - VOLUME - AC BC00333 NAME BIOSERVE - server DOMAIN e-mail Server RETRIEVAL SERVER bioserve@temin.lanl.gov DESCRIPTION Allows the retrieval of documents concerning DESCRIPTION GenBank (feature table, flatfile format, DESCRIPTION submission form, transaction protocol,etc.) DESCRIPTION the LimB database; a number of software DESCRIPTION packages (alpar,alwin, score, signal-scan, DESCRIPTION trnascan, etc.).You can also use this DESCRIPTION server to retrieve a GenBank entry or to be DESCRIPTION aware of any overlap in sequencing effort DESCRIPTION with other investigators (cdnainform). AUTHOR - RT - ADDRESS Group T-10, Los Alamos National Laboratory, USA CONTACT michael@genome.lanl.gov SITE - SITE-CONTACT - OS - LANGUAGE - VOLUME - AC BC00334 NAME EMBL Network File Server DOMAIN e-mail Server RETRIEVAL SERVER netserv@embl-heidelberg.de DESCRIPTION This server allows the retrieval via email of DESCRIPTION EMBL and SWISS-PROT entries as well as a wide DESCRIPTION variety of databases. It also allows the DESCRIPTION retrieval of public domain software for MS-DOS DESCRIPTION computers, the Apple Macintosh,DEC ,VAX/VMS, DESCRIPTION and UNIX. The programs are distributed in DESCRIPTION a form that is first compressed and then DESCRIPTION converted from binary to a printable ASCII DESCRIPTION text file. DESCRIPTION Note : You can also obtain all of these DESCRIPTION databases and software by FTP.If you have DESCRIPTION access to FTP you should use that method DESCRIPTION rather than use the email file server. AUTHOR - RT - ADDRESS European Biology Molecular Laboratory ADDRESS (EMBL) Heidelberg / Germany CONTACT nethelp@ebi.ac.uk SITE - SITE-CONTACT nethelp@ebi.ac.uk OS - LANGUAGE - VOLUME - AC BC00335 NAME EST Report Mail Server DOMAIN e-mail Server RETRIEVAL SERVER retrieve@ncbi.nlm.nih.gov SERVER retrieve@ebi.ac.uk DESCRIPTION Allows the retrieval of Expressed Sequence DESCRIPTION Tag (EST) sequences from the dbEST collection. DESCRIPTION You can request ESTs by sepcifying eith their DESCRIPTION NCBI id or their GenBank AC numbers, GDB ids.. AUTHOR - RA Boguski M.S. Lowe T.M. Tolstoshev C.M.; RT "dbEST--database for "expressed sequence tags"."; RL Nat. Genet. 4:332-3(1993). RX Medline; 94004957. RX SeqAnalRef; BOGM9301. ADDRESS National Center for Biotechnology Information ADDRESS National Library of Medicine/NIH/Bethesda/USA CONTACT carolyn@ncbi.nlm.nih.gov SITE WWW Server at URL http://www.ncbi.nlm.nih.gov/dbEST/index.html SITE-CONTACT carolyn@ncbi.nlm.nih.gov SITE WWW Server at URL http://www.ebi.ac.uk/dbest/db_mirr.html SITE-CONTACT nethelp@ebi.ac.uk OS - LANGUAGE - VOLUME - AC BC00336 NAME GENE-SERVER e-mail Server DOMAIN e-mail Server RETRIEVAL SERVER gene-server@bchs.uh.edu DESCRIPTION Allows to retrieve entries from the GenBank and PIR sequence DESCRIPTION databases using various text search parameters. It also allows DESCRIPTION the retrieval of public domain software for MS-DOS computers, DESCRIPTION the Apple Macintosh, DEC VAX/VMS, and UNIX as well as additional DESCRIPTION text files such as the BIO-Matrix newsletters. AUTHOR - RT - ADDRESS University of Houston / USA CONTACT To report problems: gene-server-management@evolution.bchs.uh.edu SITE - SITE-CONTACT - OS - LANGUAGE - VOLUME - AC BC00337 NAME GENIUSnet sequence-server DOMAIN e-mail Server RETRIEVAL SERVER netserv@genius.embnet.dkfz-heidelberg.de DESCRIPTION Allows to retrieve entries from the EMBL, DESCRIPTION GenBank, SWISS-PROT and PIR sequence databases DESCRIPTION using either the entry name or the accession DESCRIPTION number. The sequences returned are in the GCG DESCRIPTION format. AUTHOR - RT - ADDRESS German Cancer Research Centre (DKFZ) / ADDRESS Heidelberg / Germany CONTACT dok248@genius.embnet.dkfz-heidelberg.de SITE - SITE-CONTACT - OS - LANGUAGE - VOLUME - AC BC00338 NAME PDB - server DOMAIN e-mail Server RETRIEVAL SERVER fileserv@pb1.pdb.bnl.gov DESCRIPTION Provides PDB general information and DESCRIPTION documentation files. AUTHOR - RT - ADDRESS Protein Data Bank / Brookhaven National ADDRESS Laboratory / USA CONTACT skora@bnl.gov SITE - SITE-CONTACT - OS - LANGUAGE - VOLUME - COMMENTS To get help send a message containing the COMMENTS following type of line: COMMENTS send info your_e-mail_address. AC BC00339 NAME RDP DOMAIN e-mail Server RETRIEVAL SERVER server@rdp.life.uiuc.edu DESCRIPTION Access to data and software relative to ribosomal RNA sequences. AUTHOR - ADDRESS Ribosomal Database Project / University of Illinois CONTACT To report problems: rdp@phylo.life.uiuc.edu SITE - SITE-CONTACT - OS - LANGUAGE - VOLUME - AC BC00340 NAME TM7 DOMAIN e-mail Server RETRIEVAL SERVER tm7@embl-heidelberg.de DESCRIPTION The aim is to have all data relevant to G protein-coupled DESCRIPTION receptors that possess the 7 transmembrane helical motif. AUTHOR - RT - ADDRESS European Molecular Biology Laboratory (EMBL) Heidelberg ADDRESS International Centre for Genetic Engineering and Biotechnology CONTACT To report problems: vriend@embl-heidelberg.de SITE - SITE-CONTACT - OS - LANGUAGE - VOLUME -