Catalogue of Molecular Biology Programs Release 6.1 23 Jul 1999 All thanks are in the file biocatal.thanks. ===================================================================== AC BC00174 NAME PDBLIB DOMAIN Protein analysis tools DESCRIPTION A C++ macromolecular class library AUTHOR W. Chang, I.N. Shindyalov, C. Puu and P.E. Bourne RA Chang W., Shindyalov I.N., Puu C., Bourne P.E.; RT "Design and application of PDBlib, a C++ RT macromolecular class library."; RL Comput. Appl. Biosci. 10(6):575-586(1994). RX SeqAnalRef; CHAW9401. RA Chang W., Shindyalov I.N., Pu C., Bourne P.E.; RT "Design and application of a C++ macromolecular class library."; RL (In) ISMB-94; Proceedings Second International Conference RL on Intelligent Systems for Molecular Biology, Altman R., RL Brutlag D., Karp P., Lathrop R., Searls D., Eds., pp70-77, RL AAAI Press, Menlo Park, (1994). RX SeqAnalRef; CHAW9402. ADDRESS - CONTACT - SITE ftp anonymous cuhhca.hhmi.columbia.ed SITE Directory /pub/programs/PDB/PDBlib SITE-CONTACT - OS Unix LANGUAGE C (X11, Motif) VOLUME - REQUIRES - AC BC00359 NAME PROTEAN DOMAIN Protein sequence analysis DOMAIN Protein structure analysis DOMAIN Protein analysis tools DESCRIPTION PROTEAN finds structural motifs, beta sheets, alpha helices DESCRIPTION and turns, and plots hydrophobicity and charge, among DESCRIPTION other functions. A large library of analytical methods is DESCRIPTION available to predict protein structure. The software can also DESCRIPTION locate antigenic determinants and predict protease digestion DESCRIPTION patterns. The simple, elegant interface presents the most DESCRIPTION comprehensive suite of protein analysis tools available. AUTHOR - RT - ADDRESS DNASTAR, Inc. ADDRESS 1228 South Park Street ADDRESS Madison, WI 53715,U.S.A. ADDRESS Tel: +1-608-2587420, Fax: +1-608-2587439 CONTACT - sales@dnastar.com SITE - SITE-CONTACT - OS Win95/NT and MacIntosh LANGUAGE - VOLUME - REQUIRES LaserGene protein and DNA sequence analysis package COMMENTS Commercial software AC BC00482 NAME ANSIG DOMAIN Protein analysis tools DOMAIN NMR analysis DESCRIPTION ANSIG (Assignment of NMR Spectra by Interactive DESCRIPTION Graphics) is a program for inspection and assignment of NMR 2D/3D/4D DESCRIPTION homo- and heteronuclear spectra, mainly but not exclusively geared DESCRIPTION towards proteins AUTHOR P.J. Kraulis et al RA P.J. Kraulis et al, RL Biochemistry 33:3515-3531 (1994). RA P.J. Kraulis RL J. Magn. Reson. 24:627-633 (1989). ADDRESS Pharmacia & Upjohn Inc ADDRESS Biopharmaceuticals R&D, N62:5 ADDRESS S-112 87 Stockholm ADDRESS SWEDEN CONTACT krpx@sgikrpe.sto.pharmacia.se CONTACT p.j.kraulis@bioc.cam.ac.uk SITE ftp anonymous ftp.bio.cam.ac.uk/ SITE Directory /pub/ansig OS SGI (IRIX 5.2 5.3) LANGUAGE Fortran 77 VOLUME - REQUIRES GL COMMENTS The ANSIG program is *not* in the public domain. A signed license is COMMENTS required. However, the program is free for academic institutions. COMMENTS The distribution contains source code, library files, documentation COMMENTS (in HTML format), and several matrix conversion programs. Two COMMENTS different example data sets are available from the FTP sites.