Catalogue of Molecular Biology Programs Release 6.1 23 Jul 1999 All thanks are in the file biocatal.thanks. ===================================================================== AC BC00495 NAME BlueGene DOMAIN Neural Networks DOMAIN Searching databases DOMAIN Sequence display DOMAIN Sequence editor DOMAIN Sequence analysis DOMAIN Protein sequence analysis DOMAIN Structure prediction DOMAIN Database and analysis DESCRIPTION BlueGene uses a fast neural network for sequence similarity DESCRIPTION searches in Genbank and SWISS-PROT databases. DESCRIPTION BlueGene also includes graphically tools for sequence DESCRIPTION editing and analysing. DESCRIPTION BlueGene uses given and new sequence features to annotate DESCRIPTION the sequence editor and the map. AUTHOR Magic Works GmbH RT - ADDRESS Magic Works GmbH ADDRESS Potsdamer Str. 18a ADDRESS D-14513 Teltow ADDRESS GERMANY CONTACT info@magic-works.com SITE WWW Server at URL http://www.bluegene.com/ SITE-CONTACT - OS Win 3.1x or higher LANGUAGE - VOLUME 3.1MB REQUIRES 16MB RAM COMMENTS A free BlueGene demo version is ready for downloading on COMMENTS http://www.bluegene.com/. AC BC00549 NAME k2d DOMAIN Protein structure analysis DOMAIN Neural Networks DOMAIN WWW server SERVER http://kal-el.ugr.es/k2d/spectra.html DESCRIPTION Algorithm for the estimation of the percentages of DESCRIPTION protein secondary structure from UV circular dichroism DESCRIPTION spectra using a Kohonen neural network with a 2-dimensional DESCRIPTION output layer. You can either use k2d via a web server or DESCRIPTION get the program and run it on your machine. AUTHOR M.A. Andrade, P. Chacon, J.J. Merelo, F. Moran RA Andrade, M.A., Chacon P., Merelo J.J and Moran F.; RT "Evaluation of secondary structure of proteins from RT UV circular dichroism using an unsupervised learning RT neural network."; RL Prot. Eng. 6:383-390(1993). RA Merelo, J.J., Andrade M.A., Prieto A. and Moran F.; RT "Proteinotopic Feature Maps."; RL Neurocomputing. 6:443-454(1994). ADDRESS Miguel A. Andrade ADDRESS EMBL Outstation - European Bioinformatics Institute, ADDRESS Wellcome Trust Genome Campus ADDRESS Hinxton, Cambridge CB10 1SD, UK CONTACT andrade@ebi.ac.uk SITE WWW Server at URL http://kal-el.ugr.es/k2d/spectra.html SITE-CONTACT andrade@ebi.ac.uk OS Unix, DOS LANGUAGE C VOLUME 4Mb REQUIRES - COMMENTS More information at COMMENTS http://columba.ebi.ac.uk:8765/~andrade/k2d.html