Catalogue of Molecular Biology Programs Release 6.1 23 Jul 1999 All thanks are in the file biocatal.thanks. ===================================================================== AC BC00136 NAME CEPH DOMAIN Genome Mapping Databases DESCRIPTION The Centre d'Etude du Polymorphisme Humain (CEPH) maintains a DESCRIPTION database of genotypes for all genetic markers that have been DESCRIPTION tested in the reference families for linkage mapping of the DESCRIPTION human chromosomes. AUTHOR CEPH RA Dausset J., Cann H.,Cohen D., Lathrop M., Lalouel J.M., White R.; RT "Program description - Centre d'Etude du Polymorphisme Humain RT (CEPH) - collaborative genetic-mapping of the human genome."; RL Genomics 6:575-577(1990). RX Medline; 90228977. RX SeqAnalRef; DAUJ9001. ADDRESS Fondation Jean Dausset - CEPH ADDRESS 27 rue Juliette Dodu, 75010 Paris, France CONTACT cephdbm@cephb.fr SITE ftp anonymous ftp.cephb.fr SITE Directory /pub/ceph_genotype_db SITE-CONTACT postmaster@cephb.fr OS Unix, PC LANGUAGE - VOLUME - REQUIRES - COMMENTS Programs for managing the database may be downloaded from COMMENTS the FTP server for use on a PC computer. AC BC00434 NAME GDB Human Genome Data Base DOMAIN Genome Mapping Databases DOMAIN Database and analysis DOMAIN Searching databases DOMAIN WWW server SERVER http://gdbwww.gdb.org/ DESCRIPTION The GDB Human Genome Data Base is a public repository of genetic DESCRIPTION and physical maps of the human genome. It contains information DESCRIPTION about genomic regions (genes and other landmarks), mapping reagents, DESCRIPTION maps, genetic polymorphism, literature references, and contact DESCRIPTION information. GDB is an international collaboration DESCRIPTION hosted at Johns Hopkins University. AUTHOR Kenneth Fasman RA Fasman, K.H., Letovsky, S.I., Cottingham, R.W., Kingsbury, D.T.; RL Nucleic Acids Res. in press (1996). RA Fasman, K.H., Cuticchia, A.J., Kingsbury, D.T.; RT "The GDB human genome data base anno 1994."; RL Nucleic Acids Res. 22:3462-3469 (1994). RX Medline; 95023073. RX SeqAnalRef; FASK9401. ADDRESS Genome Data Base ADDRESS 2024 E. Monument Street, Suite 1-200 ADDRESS Baltimore MD 21205-2236, USA CONTACT help@gdb.org SITE ftp anonymous ftp.gdb.org SITE Directory / SITE-CONTACT help@gdb.org SITE gopher Host: gopher.gdb.org Port: 70 SITE URL gopher://gopher.gdb.org:/70/11/ SITE WWW Server at URL http://gdbwww.gdb.org/ OS - LANGUAGE - VOLUME - REQUIRES - AC BC00461 NAME DNA Stacks DOMAIN Sequence format conversion tools DOMAIN Sequence display DOMAIN Sequence editor DOMAIN Sequence analysis DOMAIN Sequence tools DOMAIN Protein sequence analysis DOMAIN Pattern Identification DOMAIN Alignment editing and display DOMAIN Alignment browser DOMAIN Genome Mapping Databases DOMAIN Phylogeny DESCRIPTION DNA Stacks (v. 1.1) is a HyperCard 2.x stack package DESCRIPTION for Macintosh computers featuring utilities for editing or DESCRIPTION coloring multiple DNA or protein sequence alignments, DESCRIPTION performing numerous data conversions or analyses related to DESCRIPTION molecular systematics, displaying auto-rescalable gene maps DESCRIPTION of mitochondrial or chloroplast genomes, extracting DNA DESCRIPTION gene sequences or translated protein sequences from about DESCRIPTION 26 animal mitochondrial genomes, and graphically depicting DESCRIPTION codon usage patterns. AUTHOR Eernisse, Douglas J. RA Eernisse, D. J.; RT "DNA Translator and Aligner: HyperCard utilities to aid RT phylogenetic analysis of molecules."; RL Comput. Appl. Biosci. 8:177-184(1992). RX Medline; 92274217. RX SeqAnalRef; EERD9201. ADDRESS D. J. Eernisse ADDRESS Dept. Biol. Sci. MH282 ADDRESS California State University ADDRESS Fullerton, CA 92634, USA CONTACT deernisse@fullerton.edu SITE ftp anonymous ftp.bio.indiana.edu SITE Directory /molbio/mac/ SITE-CONTACT archive@bio.indiana.edu SITE gopher Host: gopher://ftp.bio.indiana.edu Port: 70 SITE URL gopher://gopher://ftp.bio.indiana.edu:/70/11/IUBio-Software+Data/molbio/mac SITE WWW Server at URL http://biology.fullerton.edu/people/faculty/doug-eernisse/ OS MacOS LANGUAGE HyperTalk, C VOLUME 2 MB REQUIRES HyperCard 2.0 or greater, Macintosh