Catalogue of Molecular Biology Programs Release 6.1 23 Jul 1999 All thanks are in the file biocatal.thanks. ===================================================================== AC BC00165 NAME PAP DOMAIN Pedigree Analysis Package DESCRIPTION The Pedigree Analysis Package (PAP) is a set of FORTRAN 77 DESCRIPTION programs for computing likelihoods of genetic models on DESCRIPTION pedigrees. AUTHOR Sandra Hasstedt and Peter Cartwright RT - ADDRESS - CONTACT - SITE ftp anonymous corona.med.utah.edu SITE Directory /pub/pap/unix SITE-CONTACT Peter Cartwright pc@molson.med.utah.edu OS UNIX LANGUAGE FORTRAN 77 VOLUME - AC BC00382 NAME MapManager DOMAIN Pedigree Analysis Package DESCRIPTION Map Manager is a program for a Macintosh personal computer which DESCRIPTION helps analyze the results of genetic mapping experiments using DESCRIPTION backcrosses, intercrosses, or recombinant inbred(RI) strains. It DESCRIPTION is a specialized database program which allows easy storage, DESCRIPTION retrieval, and display of information from such mapping DESCRIPTION experiments, but it also has tools for statistical analysis of DESCRIPTION the experimental results. AUTHOR Kenneth Manly RT - ADDRESS Roswell Park Cancer Institute, Buffalo, NY, CONTACT mapmgr@mcbio.med.buffalo.edu SITE ftp anonymous mcbio.med.buffalo.edu SITE Directory /pub/MapMgr SITE-CONTACT - SITE WWW Server at URL http://mcbio.med.buffalo.edu/mapmgr.html OS Macintosh LANGUAGE - VOLUME - REQUIRES - AC BC00443 NAME ALP (Automated Linkage Pre-processor) DOMAIN Pedigree Analysis Package DOMAIN Genetic tools DOMAIN Sequence tools DESCRIPTION ALP is a Microsoft Windows application designed to analyse DESCRIPTION microsatellite DNA fragments separated on an Automated Laser DESCRIPTION Fluorescence sequencer (A.L.F., Pharmacia Biotech). ALP DESCRIPTION will: DESCRIPTION size the DNA fragments DESCRIPTION remove PCR stutter and other artefacts DESCRIPTION if provided with pedigree data, perform genotyping checks to DESCRIPTION ensure a Mendelian inheritance pattern is followed DESCRIPTION format the data for Lathrop's Linkage Program Package AUTHOR Alastair Brown, Daryll Green, Steve Woess RA Mansfield D.C., Brown A.F., Green D.K., Carothers A.D., RA Morris S.W., Evans H.J., & Wright A.F.; RT "Automation of Genetic Linkage Analysis Using Fluorescent RT Microsatellite Markers."; RL Genomics 24:225-233(1994). RX Medline; 95213011. ADDRESS MRC Human Genetics Unit ADDRESS Western General Hospital ADDRESS Crewe Road ADDRESS Edinburgh EH4 2XU ADDRESS UK CONTACT Alastair.Brown@hgu.mrc.ac.uk SITE ftp anonymous ftp.hgu.mrc.ac.uk SITE Directory /pub/ALP SITE-CONTACT Alastair.Brown@hgu.mrc.ac.uk SITE WWW Server at URL http://www.hgu.mrc.ac.uk/Sofdata/ALP/ SITE-CONTACT Alastair.Brown@hgu.mrc.ac.uk SITE ftp anonymous ftp.hgu.mrc.ac.uk SITE Directory /pub/ALP SITE ftp anonymous ftp.ebi.ac.uk SITE Directory /pub/software/linkage_and_mapping/hgu_mrc_uk SITE-CONTACT nethelp@ebi.ac.uk OS Windows 3.1,Windows NT 3.51 LANGUAGE C VOLUME 1 MB free disk space REQUIRES 386 PC or better (Floating point processor highly recommended) AC BC00468 NAME Cyrillic 2 DOMAIN Pedigree Analysis Package DESCRIPTION For pedigree drawing and managing genetic data. DESCRIPTION Cyrillic brings together all the tools for drawing family DESCRIPTION pedigrees and managing genetic data. Cyrillic will store DESCRIPTION information about genetic disease markers and patient DESCRIPTION details and assign haplotypes to DNA genotypes. DESCRIPTION Pedigrees and marker data can be imported from many sources, DESCRIPTION and data can be sent to risk calculation programs. DESCRIPTION Working with individuals and adding first degree relatives, DESCRIPTION Cyrillic pedigrees are drawn on a Windows PC much as they DESCRIPTION would on paper but with all the data stored. Cyrillic’s DESCRIPTION high-quality output is perfect for papers, reports and DESCRIPTION presenting pedigrees to patients. DESCRIPTION Commercially available at £399. AUTHOR Cherwell Scientific Publishing, Cyril Chapman RT - ADDRESS The Magdalen Centre ADDRESS Oxford Science Park ADDRESS Oxford ADDRESS OX4 4GA ADDRESS UK CONTACT csp@cherwell.com SITE WWW Server at URL http://www.cherwell.com/ProdHome/cyrilhome.html OS - LANGUAGE - VOLUME - REQUIRES Windows 3.1, Windows 95